DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eve and Hoxd11

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001414331.1 Gene:Hoxd11 / 102553842 RGDID:7730597 Length:336 Species:Rattus norvegicus


Alignment Length:102 Identity:32/102 - (31%)
Similarity:50/102 - (49%) Gaps:10/102 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GKP---QTPPPSPNECL-------SSPDNSLNGSRGSEIPADPSVRRYRTAFTRDQLGRLEKEFY 90
            |.|   .||.|.|....       ..|.......:.....|....|:.|..:|:.|:..||:||:
  Rat   220 GSPCSKATPGPEPKGAAEGGGGEGEGPPGEAGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFF 284

  Fly    91 KENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 127
            ...|:::.:|.:|:..|||.:..:|:||||||||:|:
  Rat   285 FNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKK 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 23/55 (42%)
Hoxd11NP_001414331.1 None

Return to query results.
Submit another query.