DRSC/TRiP Functional Genomics Resources

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Protein Alignment eve and hoxd3

DIOPT Version :10

Sequence 1:NP_523670.2 Gene:eve / 36039 FlyBaseID:FBgn0000606 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_002935734.1 Gene:hoxd3 / 100038058 XenbaseID:XB-GENE-478462 Length:415 Species:Xenopus tropicalis


Alignment Length:289 Identity:80/289 - (27%)
Similarity:113/289 - (39%) Gaps:80/289 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QYGKPQTPPPSP---NECLSSPDNSLNGSRGSEI------------------------------- 64
            |:..|..||.||   |........|.|.|..|:.                               
 Frog   103 QHQAPSLPPSSPSHGNSSAQKKSKSSNSSGSSQATLSKQIFPWMKESRQNAKQKNTSSSSSTPPG 167

  Fly    65 -------PADPSVRRYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRR 122
                   |..||.:|.|||:|..||..|||||:...|:.||||.|:|..|||.|..||:||||||
 Frog   168 ENCEEKSPTGPSSKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRR 232

  Fly   123 MKDKRQRIAVAWPYAAVYSDPAFAASILQAAANSVG----------MPYPPYAPAAAAAAAA--- 174
            ||.|:.:.|....::.....|..:.::  :.:|.||          :.|...:|.:.|.:..   
 Frog   233 MKYKKDQKAKGIMHSPAGQSPDRSPTL--SGSNHVGYSSQLPTVNSLSYDAPSPTSFAKSQQNMY 295

  Fly   175 AAAVATNPMMATGMPPMGMPQMP----------TMQMPGHSGHAGHPSPYGQYRYTPYHIPARPA 229
            ..|..|.|:.:.      :||..          |||  |:||.| :|:..|    :|.::.....
 Frog   296 GLAAYTAPLSSC------LPQQKRYPGAEYEHHTMQ--GNSGFA-NPNLQG----SPVYVGGNFV 347

  Fly   230 PPHPA-GPHMHHPHMMGSSATGSSYSAGA 257
            ...|| ||..:..|:...|:....||..|
 Frog   348 DSMPASGPMFNVGHLSHPSSASVDYSCAA 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eveNP_523670.2 Homeodomain 71..127 CDD:459649 33/55 (60%)
hoxd3XP_002935734.1 Homeodomain 181..237 CDD:459649 33/55 (60%)
DUF4074 352..413 CDD:463833 8/25 (32%)

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