DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12134 and Wdr89

DIOPT Version :9

Sequence 1:NP_001369072.1 Gene:CG12134 / 36038 FlyBaseID:FBgn0033471 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_082479.1 Gene:Wdr89 / 72338 MGIID:1919588 Length:386 Species:Mus musculus


Alignment Length:385 Identity:111/385 - (28%)
Similarity:164/385 - (42%) Gaps:74/385 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLAADQGFSRMAAGLSNSAVHIYNLDS---------GAGKLENFSYLPPTDSPQSVSICGVRFLD 116
            ::.||:| ..:|...||.::.||:.::         ..|.|...|:....||..|.|        
Mouse    34 TVQADKG-GLVAVLCSNGSIRIYDKETLHLLREFGGSPGLLSGVSFANSCDSVYSAS-------- 89

  Fly   117 EGPHNILVGTTDGYVRLYDLRLRGEQARFKYTQHPNVPPVPKSLSCFDRNANGRIICCGTEQFHS 181
                      |||.|:.:|.|...|:....:..:|:.     |...||.|....:||.|.|:...
Mouse    90 ----------TDGTVKCWDARGASEKPVQLFKGYPSC-----SFISFDVNCKDHVICAGAEKVDE 139

  Fly   182 NAFLVFFDVR-------ERQQMGVYFESHEDDITSLRFHAQNPDLLATGSVDGLVNVFDVKEPDE 239
            :|.|||:|.|       .|..:|.|.|:|.||||.:|||..||:|:.:||.||||||||:....|
Mouse   140 DALLVFWDARFTSQDLSTRDPLGAYSETHSDDITQVRFHPSNPNLVVSGSTDGLVNVFDLSADKE 204

  Fly   240 DEALLNTFNTESSVARLAWHRNVYDKDIISCVTTTGDFKSYECE--EGDE-VASFERPDVTAAIR 301
            ::||:.|.|:.|||:.:.|....|.:  |.|:|....|..::..  :.|| :......||.....
Mouse   205 EDALVATCNSVSSVSCIGWCGKDYKQ--IYCMTHDEGFCWWDLNHLDTDEPITCLNIQDVREITD 267

  Fly   302 RKKAANFNLINA--HNQEDGGVFLLAGTNFNKGEIL--RSVSVTSKNSLQPLANFQGNKQIVRDS 362
            .|......||..  |.:.| .:|::.|||..|..:|  .|..:|...||.     .|:...||..
Mouse   268 VKDGHLDYLIGGLYHEKMD-RLFVIGGTNTGKIHLLSCTSAGLTHVTSLH-----GGHAATVRSF 326

  Fly   363 LFDSKRSLLFTGGESGIVTVWAQDASGTAF-------------------SSEKLKARKEK 403
            .::.....|.||||...:.:|...|....|                   ||:..|.||::
Mouse   327 CWNVSEDSLLTGGEDAQLLLWKPGAMEKTFTKKDSLKIASSVQQRVRVHSSDSYKKRKQQ 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12134NP_001369072.1 WD40 56..384 CDD:421866 103/345 (30%)
WD40 repeat 59..101 CDD:293791 11/48 (23%)
WD40 repeat 108..146 CDD:293791 8/37 (22%)
WD40 repeat 153..201 CDD:293791 17/54 (31%)
WD40 repeat 207..248 CDD:293791 22/40 (55%)
WD40 repeat 300..353 CDD:293791 15/56 (27%)
WD40 repeat 359..390 CDD:293791 9/30 (30%)
Wdr89NP_082479.1 WD 1 21..65 8/31 (26%)
WD40 <26..101 CDD:225201 20/85 (24%)
WD40 38..348 CDD:295369 102/341 (30%)
WD40 65..>348 CDD:225201 95/313 (30%)
WD 2 68..107 14/56 (25%)
WD40 repeat 74..111 CDD:293791 12/54 (22%)
WD 3 112..156 15/48 (31%)
WD40 repeat 116..159 CDD:293791 14/47 (30%)
WD 4 167..207 22/39 (56%)
WD40 repeat 172..213 CDD:293791 22/40 (55%)
WD 5 213..253 11/41 (27%)
WD40 repeat 218..243 CDD:293791 7/26 (27%)
WD40 repeat 277..316 CDD:293791 12/39 (31%)
WD 6 318..357 10/38 (26%)
WD40 repeat 323..347 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850300
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1188
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43791
Inparanoid 1 1.050 123 1.000 Inparanoid score I4728
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54464
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005225
OrthoInspector 1 1.000 - - oto93593
orthoMCL 1 0.900 - - OOG6_103591
Panther 1 1.100 - - LDO PTHR22889
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4240
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

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