DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12134 and Wdr89

DIOPT Version :9

Sequence 1:NP_001369072.1 Gene:CG12134 / 36038 FlyBaseID:FBgn0033471 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_006240297.4 Gene:Wdr89 / 314243 RGDID:1307393 Length:437 Species:Rattus norvegicus


Alignment Length:383 Identity:113/383 - (29%)
Similarity:171/383 - (44%) Gaps:58/383 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YVLSLAADQGFSRMAAGL-----SNSAVHIYNLDSGAGKLENFSYLPPTDSPQSVSICGVRFLDE 117
            |:|.:...:.......||     ||.::.||:.:: ...|..||     .||..::  ||||.: 
  Rat    76 YLLGIDTSKTVPAEKGGLVAVLCSNGSIRIYDKET-LNLLREFS-----GSPGLLN--GVRFAN- 131

  Fly   118 GPHNILVGTTDGYVRLYDLRLRGEQARFKYTQHPNVPPVPKSLSCFDRNANGRIICCGTEQFHSN 182
            ...|:...:|||.|:.:|.||..|:....:..:|:     .....||.|....|||.|.|:...:
  Rat   132 SCDNVYSASTDGTVKCWDARLASEKPAQLFKGYPS-----NIFISFDVNCKDHIICAGAEKVEDD 191

  Fly   183 AFLVFFDVR-------ERQQMGVYFESHEDDITSLRFHAQNPDLLATGSVDGLVNVFDVKEPDED 240
            |.|||:|.|       .|..:|.|.|:|.||||.:|||..||:::.:||.||||||||:...:|:
  Rat   192 ALLVFWDARFTSQDLSTRDPLGAYSETHSDDITQVRFHPSNPNMVVSGSTDGLVNVFDLSVDNEE 256

  Fly   241 EALLNTFNTESSVARLAWHRNVYDKDIISCVTTTGDFKSYECE--EGDE-VASFERPDVTAAIRR 302
            :||:.|.|:.|||:.:.|....|.:  |.|:|....|..::..  :.|| :......||......
  Rat   257 DALVATCNSVSSVSCIGWCGRDYKQ--IYCMTHDEGFCWWDLNHLDTDEPITCLNIQDVRDVTDV 319

  Fly   303 KKAANFNLINA--HNQEDGGVFLLAGTNFNKGEILRSVSVTSKNSLQPLANFQ-GNKQIVRDSLF 364
            |:.....||..  |...| .:|::.|||..|..:|.    .:|..|..:.:.| |:...||...:
  Rat   320 KEGHLDYLIGGLYHENMD-RLFVIGGTNLGKIHLLS----CTKTGLSHVTSLQGGHAATVRSFCW 379

  Fly   365 DSKRSLLFTGGESGIVTVWAQDASGTAF-------------------SSEKLKARKEK 403
            ......|.||||...:.:|...|....|                   ||:..|.||::
  Rat   380 TVSEDSLLTGGEDAQLLLWKPGAVEKTFTKKDSLKIASSVQQRVRVHSSDSYKKRKQQ 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12134NP_001369072.1 WD40 56..384 CDD:421866 105/343 (31%)
WD40 repeat 59..101 CDD:293791 10/46 (22%)
WD40 repeat 108..146 CDD:293791 13/37 (35%)
WD40 repeat 153..201 CDD:293791 17/54 (31%)
WD40 repeat 207..248 CDD:293791 21/40 (53%)
WD40 repeat 300..353 CDD:293791 13/54 (24%)
WD40 repeat 359..390 CDD:293791 9/30 (30%)
Wdr89XP_006240297.4 WD40 91..399 CDD:421866 103/328 (31%)
WD40 repeat 125..163 CDD:293791 13/40 (33%)
WD40 repeat 168..216 CDD:293791 16/47 (34%)
WD40 repeat 224..264 CDD:293791 20/39 (51%)
WD40 repeat 269..309 CDD:293791 9/41 (22%)
WD40 repeat 328..367 CDD:293791 11/43 (26%)
WD40 repeat 374..398 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353994
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1188
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43791
Inparanoid 1 1.050 129 1.000 Inparanoid score I4558
OMA 1 1.010 - - QHG54464
OrthoDB 1 1.010 - - D1546666at2759
OrthoFinder 1 1.000 - - FOG0005225
OrthoInspector 1 1.000 - - oto97131
orthoMCL 1 0.900 - - OOG6_103591
Panther 1 1.100 - - LDO PTHR22889
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4240
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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