DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12134 and SPCC63.06

DIOPT Version :9

Sequence 1:NP_001369072.1 Gene:CG12134 / 36038 FlyBaseID:FBgn0033471 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_587980.1 Gene:SPCC63.06 / 2538796 PomBaseID:SPCC63.06 Length:331 Species:Schizosaccharomyces pombe


Alignment Length:366 Identity:89/366 - (24%)
Similarity:162/366 - (44%) Gaps:59/366 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IGDEDTCSAQDLAAEFQLKYKPQDEVSVSLQREYVLSLAADQGFSRMAAGLSNSAVHIYNLDSGA 89
            :.:||.|...|:.   |||    |.|.||      .|..:...|.:      .:.:.|:.:....
pombe    10 VSNEDECFIYDIE---QLK----DNVVVS------YSTGSWSCFDK------GTLLEIFKVPKAH 55

  Fly    90 GKLENFSYLPPTDSPQSVSICGVRFLDEGPHNILVGTTDGYVRLYDLRLRGEQARFKYTQHPNVP 154
               .|.:.:...|....|..||               ::|.:.|:|:|.:.:.|...:||. :.|
pombe    56 ---TNITGIISCDQLNGVITCG---------------SEGEIHLWDIRSQAKSAVRSWTQQ-STP 101

  Fly   155 PVPKSLSCFDRNANGRIICCGTEQFHSNAFLVFFDVRERQQM-GVYFESHEDDITSLRFHAQNPD 218
                 .:|...|...: ...|:|...|.|.:..:|||..|:: ..:.::|.||||.|:||.::.:
pombe   102 -----FTCIALNKKNQ-FATGSELTRSLASVQLWDVRSEQKLIRQWNDAHNDDITHLQFHPKDNE 160

  Fly   219 LLATGSVDGLVNVFD-VKEPD----EDEALLNTFNTESSVARLAWHRNVYDKDIISCVTTTGDFK 278
            ||.||||||||::.| .||.|    |::.||:..|..:|: .||   ....|..:..::....:.
pombe   161 LLLTGSVDGLVSLLDTTKEEDSTDPEEDPLLHVINHGASI-HLA---KFVSKKRVMVLSHMESYA 221

  Fly   279 SYECEEGDEVASFERPDVTAA--IRRKKAANFNLINAHNQEDGGVFLLAGTNFNKGEILRSVSVT 341
            .|:.:...:..::...::.:.  :|.:.:.:: :||..:..|.....||..:|:..|....:..|
pombe   222 MYKLKRDKDEKTWSSNELFSIDDLRAELSCSY-VINEVSTSDKQFCALAFGDFSNHETKFVLVDT 285

  Fly   342 SKNSL--QPLANFQGNKQIVRDSLFDSKRSLLFTGGESGIV 380
            |...|  :|....:.:::|.|...||.|..:.::|||.|::
pombe   286 STGELKKEPTKLERASEEICRAISFDVKNDVYYSGGEDGLL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12134NP_001369072.1 WD40 56..384 CDD:421866 78/335 (23%)
WD40 repeat 59..101 CDD:293791 4/41 (10%)
WD40 repeat 108..146 CDD:293791 7/37 (19%)
WD40 repeat 153..201 CDD:293791 11/48 (23%)
WD40 repeat 207..248 CDD:293791 22/45 (49%)
WD40 repeat 300..353 CDD:293791 12/54 (22%)
WD40 repeat 359..390 CDD:293791 8/22 (36%)
SPCC63.06NP_587980.1 WD40 5..>331 CDD:225201 89/366 (24%)
WD40 47..>180 CDD:295369 44/157 (28%)
WD40 repeat 59..97 CDD:293791 9/52 (17%)
WD40 repeat 102..142 CDD:293791 10/40 (25%)
WD40 repeat 150..185 CDD:293791 18/34 (53%)
WD40 repeat 200..241 CDD:293791 4/44 (9%)
WD40 repeat 255..298 CDD:293791 11/42 (26%)
Salt_tol_Pase <261..330 CDD:302929 18/66 (27%)
WD40 repeat 305..329 CDD:293791 8/22 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1188
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43791
Inparanoid 1 1.050 76 1.000 Inparanoid score I1889
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005225
OrthoInspector 1 1.000 - - oto101270
orthoMCL 1 0.900 - - OOG6_103591
Panther 1 1.100 - - LDO PTHR22889
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4240
TreeFam 1 0.960 - -
1110.820

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