DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12134 and wdr89

DIOPT Version :10

Sequence 1:NP_610542.1 Gene:CG12134 / 36038 FlyBaseID:FBgn0033471 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001161430.1 Gene:wdr89 / 100148281 ZFINID:ZDB-GENE-090319-3 Length:379 Species:Danio rerio


Alignment Length:410 Identity:123/410 - (30%)
Similarity:184/410 - (44%) Gaps:79/410 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EDTCSAQDLAAEFQLKYKPQDEVSVSLQREYVL--SLAADQGFSRMAAGLSNSAVHIYNLDS--G 88
            |||.....:|...|    |.:..       |:|  ||||.   ..:|...||.:||::|.::  .
Zfish     5 EDTFRTLAIARRLQ----PSEAT-------YILDVSLAAS---DVLAVCCSNHSVHLHNRETLHQ 55

  Fly    89 AGKLENFSYLPPTDSPQSVSICGVRFLDEGPHNILVGTTDGYVRLYDLRLRGEQARFKYTQHPNV 153
            .|:.:.          .:..:|||||....||.:..|:.||.:|.:|:|.....:...:...|. 
Zfish    56 VGQFQG----------HTAPVCGVRFSHMSPHLLFSGSADGTIRSWDIRRPDSDSVQVFRSDPT- 109

  Fly   154 PPVPKSLSCFDRNANGRIICCGTEQFHSNAFLVFFD---VRERQQMGVYFESHEDDITSLRFHAQ 215
                .|...||.:...|::|.||||...::||||:|   |::|..:|||.|||.||:|:::||.|
Zfish   110 ----HSYCSFDVSCTDRVLCAGTEQVEEDSFLVFWDARMVQDRGPLGVYSESHSDDVTAVKFHPQ 170

  Fly   216 NPDLLATGSVDGLVNVFDVKEPDEDEALLNTFNTESSVARLAWHRNVYDKDIISCVTTTGDFKSY 280
            ..|.||:|..||||||||:....||:||:.|.|..||.:.|.|...  |.|.:.|:|.       
Zfish   171 QADRLASGGTDGLVNVFDLSLGGEDDALVTTCNCNSSASSLCWTGK--DLDRLLCLTH------- 226

  Fly   281 ECEEGDEVASFERPDVTAAIRRKKAANFN-LINAHNQEDGGV---FLLAGT------------NF 329
              :||..:....|||....:....:|:.. |:    |...||   :.:.||            ..
Zfish   227 --DEGLHLWDVARPDSDDTLTLLSSADARPLV----QLPDGVSLEYFIGGTWLPDEERTLLVGGS 285

  Fly   330 NKGEI-LRSVSVTSKNSLQPLANFQGNKQIVRDSLFDSKRSLLFTGGESGIVTVWAQDA------ 387
            |:||: |...|.:....::.|..  |:...||...:|:....|.||||.|.:..|...|      
Zfish   286 NQGELHLLDCSGSGLRLIKSLKG--GHSATVRCFQWDAIGRSLVTGGEDGQLLQWKAGAEEISVG 348

  Fly   388 ---SGTAFSSEKLKARKEKK 404
               |..:.||.:||.:..:|
Zfish   349 KKESLKSISSMQLKTKAHRK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12134NP_610542.1 WD40 56..384 CDD:475233 109/351 (31%)
WD40 repeat 59..101 CDD:293791 12/45 (27%)
WD40 repeat 108..146 CDD:293791 13/37 (35%)
WD40 repeat 153..201 CDD:293791 19/50 (38%)
WD40 repeat 207..248 CDD:293791 21/40 (53%)
WD40 repeat 300..353 CDD:293791 13/69 (19%)
WD40 repeat 359..390 CDD:293791 12/39 (31%)
wdr89NP_001161430.1 WD40 repeat 25..60 CDD:293791 12/37 (32%)
WD40 33..339 CDD:475233 103/340 (30%)
WD40 repeat 67..107 CDD:293791 13/39 (33%)
WD40 repeat 114..155 CDD:293791 17/40 (43%)
WD40 repeat 162..203 CDD:293791 21/40 (53%)
WD40 repeat 208..233 CDD:293791 8/35 (23%)
WD40 repeat 255..307 CDD:293791 11/55 (20%)
WD40 repeat 314..338 CDD:293791 9/23 (39%)

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