DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3j and AT1G66070

DIOPT Version :10

Sequence 1:NP_610541.1 Gene:eIF3j / 36037 FlyBaseID:FBgn0027619 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_564865.1 Gene:AT1G66070 / 842921 AraportID:AT1G66070 Length:226 Species:Arabidopsis thaliana


Alignment Length:238 Identity:78/238 - (32%)
Similarity:124/238 - (52%) Gaps:17/238 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDWESAADSEVVIRPTAAASVNKWEGEDEDE-DIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKAL 66
            ||||   |.::...|......:.|:.||.|| :|||||||::: :..:.|....||.| .|.||.
plant     2 DDWE---DEKIAPLPAKVELKSNWDDEDVDENEIKDSWEDDDD-EPAQPPVINPAPEK-APKKAA 61

  Fly    67 KAKLEQQA-LLEEEAEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTSTCGGLDAFNP 130
            ...:|::. .:|...||.:...|.|   :|||||.|::.|.:|.:...|.|||......||.|.|
plant    62 PKTVEKKGKAVEVPKEAPKEKPLDP---IAEKLRQQRLVEEADYRATAELFGVKDDDKNLDMFIP 123

  Fly   131 ETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVEILHSEKLKLEK 195
            :::.:|.|:...:|.::..:.:|.|:...::.::|....|:.|||:|.|..::..:.:||||.||
plant   124 KSESDFLEYAEMISHRIKPYEKSYHYIALLKTIMRLSLTNMKAADVKDVASSITTIANEKLKAEK 188

  Fly   196 --ANAKKPAGKGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFM 236
              |..||..||.|..:..:..:|.:.|.....:||     |||
plant   189 EAAAGKKKGGKKKQLIVDKANDDLVAGPYDAMDDF-----DFM 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3jNP_610541.1 eIF3_subunit 3..236 CDD:462530 76/236 (32%)
AT1G66070NP_564865.1 eIF3_subunit 1..185 CDD:462530 61/190 (32%)

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