DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3j and nopo

DIOPT Version :10

Sequence 1:NP_610541.1 Gene:eIF3j / 36037 FlyBaseID:FBgn0027619 Length:236 Species:Drosophila melanogaster
Sequence 2:XP_061496515.1 Gene:nopo / 1277198 VectorBaseID:AGAMI1_008721 Length:702 Species:Anopheles gambiae


Alignment Length:249 Identity:110/249 - (44%)
Similarity:151/249 - (60%) Gaps:22/249 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADDWESAAD--SEVVIRPTAAASVNKWEGEDEDEDIKDSWED---EEEKKD----EEKPTKTEA 56
            |.||||:.|:  .|.:.   |.|.||||.||||| |:||:|||   ||||||    |:.|||...
Mosquito   463 MEDDWEALAEQKGEQLF---AKADVNKWAGEDED-DVKDNWEDDDEEEEKKDAPKQEDTPTKNAK 523

  Fly    57 PAKPKPNKALKAKLEQQALLEEEAEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-- 119
            |.|....|.|| |.:.:.|..||.|   .||::|.::||||.||||:||.:|||.|.|..|:|  
Mosquito   524 PKKAAQQKKLK-KEDLERLQREEEE---FANMTPEQQLAEKRRLQKLQEENDLKTAMETLGITPM 584

  Fly   120 STCGGLDAFNPETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVE 184
            ||..|:|..:|.|||||.|....:|.|:..:|.|..:..|:|:|:..|..:||:.:|:|.|..::
Mosquito   585 STGNGIDGMHPTTKEEFTELAEAISKKLANYRASTEYQGFLEELLLKLFASLSSNNIRKAKTTLD 649

  Fly   185 ILHSEKLKLEKAN-AKKPAG-KGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFM 236
            .|:.||.|:||.: .||..| |.|.|:.:..||..::.|:...:|: :||||||
Mosquito   650 NLYLEKQKVEKGDKPKKTKGIKVKAKLRVEGENTTLNEYETKYDDY-DDYDDFM 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3jNP_610541.1 eIF3_subunit 3..236 CDD:462530 107/245 (44%)
nopoXP_061496515.1 None

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