DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12133 and ctrb.3

DIOPT Version :10

Sequence 1:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001017724.1 Gene:ctrb.3 / 550419 ZFINID:ZDB-GENE-050417-229 Length:265 Species:Danio rerio


Alignment Length:281 Identity:82/281 - (29%)
Similarity:122/281 - (43%) Gaps:57/281 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 CG--QSPP--SSY--IVGGMEAQSNQFPWTVLLGYEAYTAKQRPSPMCAGSLIASRYVLTAAHCL 111
            ||  ..||  |.|  ||.|.||..:.:||.|.|  :.:|...    .|.||||...:|:||||| 
Zfish    19 CGVPAIPPVVSGYARIVNGEEAVPHSWPWQVSL--QDFTGFH----FCGGSLINEFWVVTAAHC- 76

  Fly   112 NVNDFYVARVRLGEH-----DTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHEQYYTRNGRHYN 171
            :|...:  ||.||||     :|:.|..                .:.|.....|.||  .:....|
Zfish    77 SVRTSH--RVILGEHNKGKSNTQEDIQ----------------TMKVSKVFTHPQY--NSNTIEN 121

  Fly   172 DIALLRLKSRVKYTLQIRPICIWPGIELSTSSFKNFPFQIAGWGDSGLQQKST--VLRQGTISGM 234
            ||||::|.:.......:.|:|:   .|.|.:.........:|||.:......|  .|:|..:..:
Zfish   122 DIALVKLTAPASLNAHVSPVCL---AEASDNFASGMTCVTSGWGVTRYNALFTPDELQQVALPLL 183

  Fly   235 SPDECLNRYPTLLVDKDIQICAMGWDGTDTGLGDSGSPLMASVGRGADQFYYLAGITSYGGG--- 296
            |.::|.|.:.:.:  :|..||| |..|..:.:||||.||:..    .|..:.|.||.|:|..   
Zfish   184 SNEDCKNHWGSNI--RDTMICA-GAAGASSCMGDSGGPLVCQ----KDNIWTLVGIVSWGSSRCD 241

  Fly   297 PSSYGYGPAVYTKTSSYYEWI 317
            |:.    |.||.:.:...:|:
Zfish   242 PTM----PGVYGRVTELRDWV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 75/264 (28%)
ctrb.3NP_001017724.1 Tryp_SPc 33..258 CDD:214473 75/265 (28%)

Return to query results.
Submit another query.