DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12133 and CG5246

DIOPT Version :10

Sequence 1:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:276 Identity:66/276 - (23%)
Similarity:118/276 - (42%) Gaps:48/276 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GQSPPSSYIVGGMEAQSNQFPWTVLLGYEAYTAKQRPSPMCAGSLIASRYVLTAAHCLNVNDFYV 118
            |...|.:.::||:::.:...|      |:..........:|.||:||.:::||||||:.....|:
  Fly    34 GHVKPETRVIGGVDSPTGFAP------YQVSIMNTFGEHVCGGSIIAPQWILTAAHCMEWPIQYL 92

  Fly   119 ARVRLGEHDTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHEQYYTRNGRHYNDIALLRLKSRVK 183
             ::..|..|... |...:|.:|:||    |...|             ...::|||||:.....:.
  Fly    93 -KIVTGTVDYTR-PGAEYLVDGSKI----HCSHD-------------KPAYHNDIALIHTAKPIV 138

  Fly   184 YTLQIRPICIWPGIELSTSSFKNFP-----FQIAGWGDSGLQQK-STVLRQGTISGMSPDECLNR 242
            |....:||        ..:|..:.|     ..:.|||.:....: ||.|::..::.:..|.|.:|
  Fly   139 YDDLTQPI--------KLASKGSLPKVGDKLTLTGWGSTKTWGRYSTQLQKIDLNYIDHDNCQSR 195

  Fly   243 YPTLLVDKDIQICAMGWDGTDTGLGDSGSPLMASVGRGADQFYYLAGITSYGGGPSSYGYGPAVY 307
            ........:..:|....:|..:..||||.||:       |....|.|:.::|.. .:.|| |.|:
  Fly   196 VRNANWLSEGHVCTFTQEGEGSCHGDSGGPLV-------DANQTLVGVVNWGEA-CAIGY-PDVF 251

  Fly   308 TKTSSYYEWIKKKIND 323
            ...:.|::||::.:.|
  Fly   252 GSVAYYHDWIEQMMTD 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 61/260 (23%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 63/262 (24%)

Return to query results.
Submit another query.