DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12133 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:294 Identity:88/294 - (29%)
Similarity:139/294 - (47%) Gaps:51/294 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PMVAGDKLPDSRVCGQSPPSSYIVGGMEAQSNQFPWTVLLGYEAYTAKQRPSPMCAGSLIASRYV 104
            |:..|:|.|      .:|....||||:.|..::|||..:|   ..:.||    .|.||||.:.::
  Fly   384 PLQCGNKNP------VTPDQERIVGGINASPHEFPWIAVL---FKSGKQ----FCGGSLITNSHI 435

  Fly   105 LTAAHCL-NVNDFYVARV--RLGEHDTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHE--QYYT 164
            ||||||: .:..:.||.:  .||:::...|            :...||...:...|.|:  ::.|
  Fly   436 LTAAHCVARMTSWDVAALTAHLGDYNIGTD------------FEVQHVSRRIKRLVRHKGFEFST 488

  Fly   165 RNGRHYNDIALLRLKSRVKYTLQIRPICIWPGIELSTSSFKNFPFQIAGWG---DSGLQQKSTVL 226
            .    :||:|:|.|...|.:|.:|:|||:.......:.|:......:||||   ::|.|  .::|
  Fly   489 L----HNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQ--PSIL 547

  Fly   227 RQGTISGMSPDECLNRY----PTLLVDKDIQICAMGWDGTDTGLGDSGSPLMASVGRGADQFYYL 287
            ::..|...:..||..:|    |..:::.  .||| |....|:..||||.|::.:.|..    |..
  Fly   548 QKVDIPIWTNAECARKYGRAAPGGIIES--MICA-GQAAKDSCSGDSGGPMVINDGGR----YTQ 605

  Fly   288 AGITSYGGGPSSYGYGPAVYTKTSSYYEWIKKKI 321
            .||.|:|.| ...|..|.|||:.:|...||.|.|
  Fly   606 VGIVSWGIG-CGKGQYPGVYTRVTSLLPWIYKNI 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 79/266 (30%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 81/269 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.