DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12133 and St14

DIOPT Version :10

Sequence 1:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:279 Identity:71/279 - (25%)
Similarity:123/279 - (44%) Gaps:61/279 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IVGGMEAQSNQFPWTVLL-----GYEAYTAKQRPSPMCAGSLIASRYVLTAAHCLNVNDFYVARV 121
            :|||..|...::||.|.|     |:           :|..|||:..::::||||......:    
  Rat   615 VVGGTNADEGEWPWQVSLHALGQGH-----------LCGASLISPDWLVSAAHCFQDETIF---- 664

  Fly   122 RLGEHDTENDPDYTW-----LPNGAKIWAPAHVDIDVDLRVPHEQYYTRNGRHYN-DIALLRLKS 180
            :..:|.       .|     |.:.:|..|....:..:...:.|..:   |...:: |||||.|:.
  Rat   665 KYSDHT-------MWTAFLGLLDQSKRSASGVQEHKLKRIITHPSF---NDFTFDYDIALLELEK 719

  Fly   181 RVKYTLQIRPICIWPGIELSTSSFKNFP----FQIAGWGDSGLQQKST---VLRQGTISGMSPDE 238
            ..:|:..:||||:.....:       ||    ..:.|||.:  ::..|   :|::|.|..::...
  Rat   720 PAEYSTVVRPICLPDNTHV-------FPAGKAIWVTGWGHT--KEGGTGALILQKGEIRVINQTT 775

  Fly   239 CLNRYPTLLVDKDIQICAMGW--DGTDTGLGDSGSPLMASVGRGADQFYYLAGITSYGGGPSSYG 301
            |....|..:..:  .:| :|:  .|.|:..||||.|| :||.:  |...:.||:.|:|.|.:...
  Rat   776 CEELLPQQITPR--MMC-VGFLSGGVDSCQGDSGGPL-SSVEK--DGRIFQAGVVSWGEGCAQRN 834

  Fly   302 YGPAVYTKTSSYYEWIKKK 320
             .|.|||:.....:|||::
  Rat   835 -KPGVYTRIPEVRDWIKEQ 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 68/274 (25%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 71/277 (26%)
Blue background indicates that the domain is not in the aligned region.

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