DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12133 and tmprss15

DIOPT Version :10

Sequence 1:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_031752048.1 Gene:tmprss15 / 100490249 XenbaseID:XB-GENE-999987 Length:994 Species:Xenopus tropicalis


Alignment Length:292 Identity:84/292 - (28%)
Similarity:126/292 - (43%) Gaps:64/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RVCGQS----PPSSYIVGGMEAQSNQFPWTVLLGYEAYTAKQRPSPMCAGSLIASRYVLTAAHCL 111
            |.||:.    ...|.||||.:|....:||.|.|.|       .....|..||:...::::||||:
 Frog   745 RECGKRLVPIKSGSKIVGGSDAALGAWPWIVSLYY-------NDRQTCGASLVNQEWLVSAAHCV 802

  Fly   112 NVNDFYVA--RVRLGEHDTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHEQYYTRNGRHYNDIA 174
            ...:...:  :.|||.|...|            :..|......:|..|.:.||..|.  ..:||.
 Frog   803 YGRNLIPSNWKARLGLHTNLN------------LTQPQIATQMIDQIVINPQYNRRT--KDSDIV 853

  Fly   175 LLRLKSRVKYTLQIRPICIWP--------GIELSTSSFKNFPFQIAGWG--DSGLQQKSTVLRQG 229
            ::.|:.:|.|:..|:|||: |        ||..|          |||||  .|| .....:|::.
 Frog   854 MMHLQFKVNYSDYIQPICL-PETDQEFSVGINCS----------IAGWGRTQSG-GPVPNILQEA 906

  Fly   230 TISGMSPDECLNRYPTLLVDKDIQICAMGWD--GTDTGLGDSGSPLMASVGRGADQFYYLAGITS 292
            .|..:|..:|..:.|...: .|..:|. |::  |.||..||||.|:|..    .:..::|.|:||
 Frog   907 EIPLISNHKCQQQMPEYNI-TDNMVCG-GYEEGGIDTCQGDSGGPMMCQ----QNNEWFLVGVTS 965

  Fly   293 YGGG---PSSYGYGPAVYTKTSSYYEWIKKKI 321
            :|.|   ||.    |.||.:.:.:..|||..|
 Frog   966 FGYGCAQPSR----PGVYVRVTEFTNWIKSFI 993

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 76/271 (28%)
tmprss15XP_031752048.1 SEA 34..>103 CDD:460188
LDLa 157..190 CDD:197566
CUB 199..305 CDD:238001
MAM 321..478 CDD:459878
CUB 501..608 CDD:395345
LDLa 620..654 CDD:238060