DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1418 and PRA1.G1

DIOPT Version :9

Sequence 1:NP_610539.1 Gene:CG1418 / 36035 FlyBaseID:FBgn0033468 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_175960.1 Gene:PRA1.G1 / 842013 AraportID:AT1G55640 Length:187 Species:Arabidopsis thaliana


Alignment Length:171 Identity:44/171 - (25%)
Similarity:76/171 - (44%) Gaps:24/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DMQSLPSLSNLPSPLQIFQMVRNSLRPW----VVFFNI---NNFKTAISMQRLNSRVIRNLSYFQ 82
            |:.|| |:.||.:.:       :|.|||    :.|.:|   ::|..|:      |||..||.:|.
plant    21 DVISL-SVHNLIASV-------SSYRPWWSEFLAFGSIDRPSSFSPAV------SRVKLNLHHFA 71

  Fly    83 ANYVFIFFVLMIYCLITAPCILLVILASAFGCHKLR--VRNSNITIVGQQLTPSQQIIALNLATA 145
            .|||.:....:...||..| :.||.:||......|.  .|:..:.:.|:.::....:..|.|.:.
plant    72 VNYVLLTAASITLFLIGDP-MALVTVASFVAMWLLLYFYRDHPLVLYGRHISDRVIVFGLILGSL 135

  Fly   146 PVLFLVGAGAVLFWTLGASCFVIAMHAIFYNIDAIVTEENE 186
            ..|:.:.:...|...:..|..:..:|||..|.|.:..:|.:
plant   136 WALWFINSLQCLILGVVTSVLLCLVHAIIRNSDDLFVQEKD 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1418NP_610539.1 PRA1 48..178 CDD:281235 36/138 (26%)
PRA1.G1NP_175960.1 PRA1 33..172 CDD:281235 37/152 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 62 1.000 Domainoid score I3740
eggNOG 1 0.900 - - E1_KOG3142
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I2495
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1344798at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19317
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.930

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