Protein Alignment CG1418 and Rabac1

DIOPT Version :10

• Sequence 1: NP_610539.1
• Gene: CG1418 / 36035
• FlyBaseID: FBgn0033468
• Length: 193
• Species: Drosophila melanogaster
• Sequence 2: NP_113962.1
• Gene: Rabac1 / 83583
• RGDID: 621002
• Length: 185
• Species: Rattus norvegicus
• Alignment Length: 159
• Identity: 56/159 - (35%)
• Similarity: 92/159 - (57%)
• Gaps: 4/159 - (2%)

  Fly    29 LPSLSNLPSPLQIFQMVRNSLRPWVVFFNINNFKTAISMQRLNSRVIRNLSYFQANYVFIFFVLM 93
            ||.|....:..:..:..|.::|||..|.:...|....::..|..|::||:.|:|:||||:|..|:
  Rat    22 LPKLIPSGAGREWLERRRATIRPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLI 86

  Fly    94 IYCLITAPCILLVILASAFG-CH--KLRVRNSNITIVGQQLTPSQQIIALNLATAPVLFLVGAGA 155
            :||::|:| :|||.||..|| |:  .||...|.:.:.|::::|:.|.......:.|..:|.|||:
  Rat    87 LYCVVTSP-MLLVALAVFFGACYILYLRTLQSKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGS 150

  Fly   156 VLFWTLGASCFVIAMHAIFYNIDAIVTEE 184
            .:||.|||:..:|..||.|:.|:....||
  Rat   151 AVFWVLGATLVLIGSHAAFHQIEPADGEE 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1418	NP_610539.1	PRA1	48..178	CDD:460846	49/132 (37%)
Rabac1	NP_113962.1	Required for interaction with prenylated RAB3A and VAMP2	30..54		5/23 (22%)
		PRA1	38..170	CDD:460846	49/132 (37%)
		Required for interaction with GDI1. /evidence=ECO:0000269|PubMed:10751420	165..185		6/15 (40%)
		Homodimerization. /evidence=ECO:0000250	175..185		2/5 (40%)
		Required for interaction with prenylated RAB3A and VAMP2	175..185		2/5 (40%)