DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1418 and PRA1.H

DIOPT Version :10

Sequence 1:NP_610539.1 Gene:CG1418 / 36035 FlyBaseID:FBgn0033468 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_567776.1 Gene:PRA1.H / 828863 AraportID:AT4G27540 Length:241 Species:Arabidopsis thaliana


Alignment Length:181 Identity:42/181 - (23%)
Similarity:68/181 - (37%) Gaps:42/181 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SGGRFSVDMQSLPSLSNLPSPLQIFQMV-----RNSLRPWVVFF--NINNFKTAISMQRLNSRVI 75
            :||.|:..:..|.::|:|.: :..|..:     .....||...|  |.:::....|.|:...||.
plant    66 TGGFFASLLSRLVTVSSLLT-INPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSSSQQARMRVH 129

  Fly    76 RNLSYFQANYVFIFFVLMIYCLITAPCILLVILAS--------------AFGCHKLRVRNSNITI 126
            .|:..|..||..:|.|.....|...|..|:.:|.|              .|..|           
plant   130 ENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKFDRH----------- 183

  Fly   127 VGQQLTPSQQIIALNL---ATAPVLFLVGAGAVLFWTLGASCFVIAMHAIF 174
                  ||.:.:::.:   |||.:|..:.....||..|..|..|:.:||.|
plant   184 ------PSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1418NP_610539.1 PRA1 48..178 CDD:460846 35/146 (24%)
PRA1.HNP_567776.1 PRA1 113..230 CDD:460846 31/133 (23%)

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