DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdrg1 and AT3G15351

DIOPT Version :9

Sequence 1:NP_610538.1 Gene:Pdrg1 / 36034 FlyBaseID:FBgn0033467 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001327625.1 Gene:AT3G15351 / 820769 AraportID:AT3G15351 Length:165 Species:Arabidopsis thaliana


Alignment Length:136 Identity:30/136 - (22%)
Similarity:51/136 - (37%) Gaps:25/136 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DLNKSIEIITKTEELADKILVNKQELTVMDKRRQETRQAMRLMEK---SEDKKVWITIGSMLVKM 66
            |..|...::.|.|..||:.|:.:.::...||.|...|:|:..:.|   :....|.....||:..:
plant     4 DPKKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMMKDI 68

  Fly    67 EREKALELLKK--------DQQKIEQQINLIYSDQKVLVNKHRDLEFKSPFSGTHL---KPLEKK 120
            .......|:::        |.           |:...::....||....||...|.   |..||.
plant    69 HGSSTKPLVQEVCSTCGSHDS-----------SEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKM 122

  Fly   121 EFDALK 126
            ||::.|
plant   123 EFESKK 128



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21162
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.