DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdrg1 and PDRG1

DIOPT Version :10

Sequence 1:NP_610538.1 Gene:Pdrg1 / 36034 FlyBaseID:FBgn0033467 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_110442.1 Gene:PDRG1 / 81572 HGNCID:16119 Length:133 Species:Homo sapiens


Alignment Length:133 Identity:39/133 - (29%)
Similarity:75/133 - (56%) Gaps:6/133 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQTDLNKSIEIITKTEELADKILVNKQELTVMDKRRQETRQAMRLMEK----SEDKKVWITIGS 61
            |...:..:.:..:.:.||||:::|.:|:::..:|.:|.:.|:.:|.::|    |||  |.:..|:
Human     1 MLSPEAERVLRYLVEVEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDLSLSED--VMVCFGN 63

  Fly    62 MLVKMEREKALELLKKDQQKIEQQINLIYSDQKVLVNKHRDLEFKSPFSGTHLKPLEKKEFDALK 126
            |.:||...:..|:::|||..::::|..:....||.||:..:.:.|....|.:|.||.:.|..|||
Human    64 MFIKMPHPETKEMIEKDQDHLDKEIEKLRKQLKVKVNRLFEAQGKPELKGFNLNPLNQDELKALK 128

  Fly   127 ANL 129
            ..|
Human   129 VIL 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdrg1NP_610538.1 PDRG1 9..108 CDD:467471 29/102 (28%)
coiled coil 22..50 CDD:467471 7/31 (23%)
coiled coil 69..98 CDD:467471 7/28 (25%)
PDRG1NP_110442.1 PDRG1 26..111 CDD:467471 24/86 (28%)
coiled coil 26..50 CDD:467471 5/23 (22%)
coiled coil 71..100 CDD:467471 7/28 (25%)

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