DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdrg1 and pdrg1

DIOPT Version :10

Sequence 1:NP_610538.1 Gene:Pdrg1 / 36034 FlyBaseID:FBgn0033467 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001017757.1 Gene:pdrg1 / 550453 ZFINID:ZDB-GENE-050417-276 Length:131 Species:Danio rerio


Alignment Length:121 Identity:36/121 - (29%)
Similarity:67/121 - (55%) Gaps:1/121 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IEIITKTEELADKILVNKQELTVMDKRRQETRQAM-RLMEKSEDKKVWITIGSMLVKMEREKALE 73
            :|.:|:.|..|:.||.:||::..:|.||...|:|: .|...|.:..|.:..|:|.:|..:|....
Zfish     9 LEHLTEVEVAAEDILTDKQQIVDLDVRRNRNREALSALRNNSPNDNVKVCFGNMFIKFPQESTRS 73

  Fly    74 LLKKDQQKIEQQINLIYSDQKVLVNKHRDLEFKSPFSGTHLKPLEKKEFDALKANL 129
            ::.|||::::::|..:.:..|..||:..:|:.|....|.:|.||...|..|:.:.|
Zfish    74 MILKDQEQLDKEITDLRTRLKAKVNRLNELQGKPELRGYNLAPLSSDEVKAINSLL 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pdrg1NP_610538.1 PDRG1 9..108 CDD:467471 29/98 (30%)
coiled coil 22..50 CDD:467471 10/28 (36%)
coiled coil 69..98 CDD:467471 6/28 (21%)
pdrg1NP_001017757.1 PDRG1 8..109 CDD:467471 29/99 (29%)
coiled coil 21..49 CDD:467471 10/27 (37%)
coiled coil 69..98 CDD:467471 6/28 (21%)

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