Protein Alignment Pal1 and Pal2

DIOPT Version :10

• Sequence 1: NP_610537.2
• Gene: Pal1 / 36033
• FlyBaseID: FBgn0283510
• Length: 541
• Species: Drosophila melanogaster
• Sequence 2: NP_525118.2
• Gene: Pal2 / 37746
• FlyBaseID: FBgn0262728
• Length: 406
• Species: Drosophila melanogaster
• Alignment Length: 433
• Identity: 158/433 - (36%)
• Similarity: 218/433 - (50%)
• Gaps: 68/433 - (15%)

  Fly    20 LLLHLLLCIR----PAVSQTQSPQRYLHNVDSNSNNNER----LHQILKGSGAGSGATQLNWPQP 76
            ||...||.|.    .:.|....|.....::....|.|||    :..::|......|..:   |:.
  Fly     4 LLFVALLAISLGYVASSSSNHLPAGLAMDLGPGVNLNERFFDQVRALIKRRLQEKGLAK---PEQ 65

  Fly    77 PKQTVPNVKTELAKLNNTYVYQNA---------------WPANNVKLGAVTAVSFDKAGNVVIFH 126
            |:..:|....:...|.|...|.|.               ||......|.||||:.|..|:.|:||
  Fly    66 PELAMPLTDDDAVALQNQRSYDNVPLPAASVPTPVLVENWPTEQHSFGQVTAVAVDPQGSPVVFH 130

  Fly   127 RVNRVWGQTTFDNRNQYQEKYRGPIRESTILALEPATGKVQYDWGKNFFYMPHGLTVDPEDNVWL 191
            |..|.|...||:..|.|.....|||:|:||..|:..||.::..||.|.||||||||:|...|.|:
  Fly   131 RAERYWDVNTFNESNIYYLIEYGPIKENTIYVLDAKTGAIKSGWGSNMFYMPHGLTIDLHGNYWI 195

  Fly   192 TDVAMHQVFKFPPRGGDGKPALTLGDAFQPGSGRK-FCKPTSVAVLDNGDFFVADGYCNARILKY 255
            |||||||.|||.|  ...||.||:|..|:|||..| .|||||:||...|:||:||||||:||||:
  Fly   196 TDVAMHQAFKFKP--FSNKPLLTIGKRFRPGSSVKHLCKPTSIAVATTGEFFIADGYCNSRILKF 258

  Fly   256 SRKGELILFWGQNTFSGISYDVAPQNFFA--IPHALTLVPELQLLCAADRENGRVQC----FLSS 314
            :..|:|:....|           |..|.:  :|||:||:..|.|||.|||||.||.|    .:||
  Fly   259 NAAGKLLRTIPQ-----------PPEFLSLQVPHAITLLEHLDLLCIADRENMRVVCPKAGLISS 312

  Fly   315 NGTFH--SQYHNQLIGDRLFSMAYTPAAGGQLVIVNGPTAELGIHPEHYNEVHGFVLSMRSKQLV 377
            :|...  :......:| |:|.:|   :.|..:..|||||:.|        .|.||.:..||:.::
  Fly   313 HGEGEPAATIQEPDLG-RVFGVA---SFGDIVFAVNGPTSML--------PVRGFTIDPRSETII 365

  Fly   378 SKFGPNNLQFQNPHDVAVTADGNEIYVAEL----NPMRIHKFV 416
            ..:|    :|:|||.:||:.:|:.:||.|:    ...|:.|:|
  Fly   366 GHWG----EFKNPHSMAVSVNGSALYVTEIGTNHQTNRVWKYV 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pal1	NP_610537.2	NHL_PAL_like	97..416	CDD:271328	139/346 (40%)
		NHL repeat	111..172	CDD:271328	26/60 (43%)
		NHL repeat	178..220	CDD:271328	24/41 (59%)
		NHL repeat	230..267	CDD:271328	20/36 (56%)
		NHL repeat	283..321	CDD:271328	20/45 (44%)
		NHL repeat	330..382	CDD:271328	15/51 (29%)
		NHL repeat	388..415	CDD:271328	10/30 (33%)
Pal2	NP_525118.2	NHL_PAL_like	102..404	CDD:271328	137/330 (42%)
		NHL repeat	115..176	CDD:271328	26/60 (43%)
		NHL repeat	182..222	CDD:271328	24/41 (59%)
		NHL repeat	233..270	CDD:271328	20/36 (56%)
		NHL repeat	277..321	CDD:271328	20/43 (47%)
		NHL repeat	329..369	CDD:271328	15/50 (30%)
		NHL repeat	372..403	CDD:271328	10/30 (33%)