Sequence 1: | NP_001137630.2 | Gene: | Pal1 / 36033 | FlyBaseID: | FBgn0283510 | Length: | 541 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017451775.1 | Gene: | Pam / 25508 | RGDID: | 3252 | Length: | 977 | Species: | Rattus norvegicus |
Alignment Length: | 535 | Identity: | 170/535 - (31%) |
---|---|---|---|
Similarity: | 259/535 - (48%) | Gaps: | 101/535 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 RLHQILKGSGAGSGATQLNWPQP---PKQTVP----NVKTELAKLNNTYVYQNAWPANNVKLGAV 111
Fly 112 TAVSFDKAGNVVIFHRVNRVWGQTTFDNRNQYQEKYRGPIRESTILALEPATGKVQYDWGKNFFY 176
Fly 177 MPHGLTVDPEDNVWLTDVAMHQVFKFPPRGGDGKPALTLGDAFQPGSGRK-FCKPTSVAV-LDNG 239
Fly 240 DFFVADGYCNARILKYSRKGELILFWGQNTFSGISYDVAPQ-NFFAIPHALTLVPELQLLCAADR 303
Fly 304 ENGRVQCFLSSNGTFHSQYHNQLIGDRLFSMAYTPAAGGQLVIVNGPTAELGIHPEHYNE---VH 365
Fly 366 GFVLSMRSKQLVSKFGPNNLQFQNPHDVAVTADGNEIYVAELNPMRIHKFV------HRSLA--- 421
Fly 422 -------------------KPMSLSASKDSRDSAISQAVGGDQVPAVAVHHPSGKAILVASLMLL 467
Fly 468 FAGSTFALALIFARRRKRGCLPFGA---------RGR---RHAWEKSDGFKLGGLL----DRDRN 516
Fly 517 GFEKLDQQASDEEQE 531 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Pal1 | NP_001137630.2 | NHL_PAL_like | 97..416 | CDD:271328 | 127/324 (39%) |
NHL repeat | 111..172 | CDD:271328 | 23/60 (38%) | ||
NHL repeat | 178..220 | CDD:271328 | 22/41 (54%) | ||
NHL repeat | 230..267 | CDD:271328 | 18/37 (49%) | ||
NHL repeat | 283..321 | CDD:271328 | 21/37 (57%) | ||
NHL repeat | 330..382 | CDD:271328 | 14/54 (26%) | ||
NHL repeat | 388..415 | CDD:271328 | 6/26 (23%) | ||
Pam | XP_017451775.1 | Cu2_monooxygen | 64..173 | CDD:395859 | |
Cu2_monoox_C | 201..347 | CDD:397669 | |||
NHL_PAL_like | 503..810 | CDD:271328 | 129/335 (39%) | ||
NHL repeat | 517..578 | CDD:271328 | 23/60 (38%) | ||
NHL repeat | 584..625 | CDD:271328 | 22/41 (54%) | ||
NHL repeat | 636..674 | CDD:271328 | 18/37 (49%) | ||
NHL repeat | 686..724 | CDD:271328 | 21/37 (57%) | ||
NHL repeat | 732..777 | CDD:271328 | 14/55 (25%) | ||
NHL repeat | 783..809 | CDD:271328 | 6/26 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166340061 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D224754at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002923 | |
OrthoInspector | 1 | 1.000 | - | - | otm45322 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105407 | |
Panther | 1 | 1.100 | - | - | O | PTHR10680 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5001 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.850 |