Protein Alignment Pal1 and pghm-1

DIOPT Version :10

• Sequence 1: NP_610537.2
• Gene: Pal1 / 36033
• FlyBaseID: FBgn0283510
• Length: 541
• Species: Drosophila melanogaster
• Sequence 2: NP_490898.1
• Gene: pghm-1 / 171746
• WormBaseID: WBGene00022144
• Length: 324
• Species: Caenorhabditis elegans
• Alignment Length: 298
• Identity: 61/298 - (20%)
• Similarity: 86/298 - (28%)
• Gaps: 131/298 - (43%)

  Fly   291 LVPEL-QLLCA----ADRENGRVQCF--LSSNGTFHSQYHNQLIG------DRLF---------- 332
            :|||. ..||.    :|:|| .:..|  |::.||.|   |..|.|      |.|.
 Worm    32 VVPEADSYLCTSLELSDQEN-YLTGFKALTTKGTAH---HILLFGCEEPGSDELVWDCGEMNKPD 92

  Fly   333 -SMAYTPAAGGQLVI-----VNGPTAELGIHPEHYNEVHGFVLSMRSKQLVSKFGPNNLQFQNPH 391
             .|...|..|.:..|     ::.|..||                                   |.
 Worm    93 DEMPRAPTCGSKPAILYAWALDAPPLEL-----------------------------------PQ 122

  Fly   392 DVA--VTADGNEIYVAELNPMRIHKFVHRSLAKPMSLSASKDSRDSAISQAVGGDQVPAVAVHHP 454
            ||.  |..|.|..::.    |::| ::|           ||...|..           .:.:.|.
 Worm   123 DVGFRVGGDSNIRHLV----MQVH-YMH-----------SKQEPDET-----------GLEITHT 160

  Fly   455 SGKAILVASLMLLFAGSTFALALIFARRRK-----RGCL--------PFGARGRRH-------AW 499
            ......:|:.|||..|.|..       |.|     ..|:        ||..|...|       .|
 Worm   161 EEPQPKLAATMLLVTGGTLP-------RNKTESFETACMIEEDVVMHPFAYRTHTHRHGKEVSGW 218

  Fly   500 ------EKSDGFKLGGLLDRD-RNGFEKLDQQASDEEQ 530
                  :..|.:||.|..|.. ...|..::.||...:|
 Worm   219 LVKEDQKHEDHWKLIGRRDPQLAQMFVPVEDQAMTIQQ 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pal1	NP_610537.2	NHL_PAL_like	97..416	CDD:271328	33/155 (21%)
		NHL repeat	111..172	CDD:271328
		NHL repeat	178..220	CDD:271328
		NHL repeat	230..267	CDD:271328
		NHL repeat	283..321	CDD:271328	13/36 (36%)
		NHL repeat	330..382	CDD:271328	8/67 (12%)
		NHL repeat	388..415	CDD:271328	8/28 (29%)
pghm-1	NP_490898.1	Cu2_monooxygen	27..145	CDD:460053	33/156 (21%)
		Cu2_monoox_C	166..316	CDD:461021	23/98 (23%)