DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL94

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001322116.1 Gene:AGL94 / 843289 AraportID:AT1G69540 Length:367 Species:Arabidopsis thaliana


Alignment Length:406 Identity:82/406 - (20%)
Similarity:144/406 - (35%) Gaps:128/406 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYAST----- 60
            |||.|::|.::.:...||.|:.||:.|:||||.|||:|||.::.|::||...|    ||.     
plant     1 MGRVKLKIKKLQNMNGRQCTYTKRRHGIMKKAKELSILCDIDVVLLMFSPMGK----ASICIGKH 61

  Fly    61 DMDRVLLKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNM 125
            .:..|:.|:.:                      :||..           |.:.|...::...:..
plant    62 SIGEVIAKFAQ----------------------LSPQE-----------RAKRKLENLEALRKTF 93

  Fly   126 MQRNQMAIGGAGAPRQLPNSSYTLPVSVPVPGSYGDNLLQASPQMS--HTNISPRPSSSETDSVY 188
            |:.|          ..:..|.:...:|.|......:.:.....|:|  ||.:|........||| 
plant    94 MKAN----------HDIDISKFLDRISTPTVEVLSEKIRFLQTQLSDIHTRLSYWTDVDNIDSV- 147

  Fly   189 PSGSMLEMSNGYPHSHSPLVGSPSPGPSPGIAHHLSIKQQSPGSQNGRASNLRVVIPPTIAPIPP 253
              ..:.::.:....|.:.:.|..:..|.         :||.....:...:.|:..|         
plant   148 --DVLQQLEHSLRQSLAQIYGRKASMPQ---------RQQQQLMSSQCKNQLQTEI--------- 192

  Fly   254 NMSAPDDVGYADQRQSQ----------TSLNTPVVT---------LQTPIPALTSYSFGAQDFSS 299
                  |:.:..:.:.|          .::|.|:..         :...|....|.:.|    :.
plant   193 ------DIDFGMEMEQQLENFSWVRTDENMNVPIEEEDPNLQLHHMYKDITCSASSALG----NY 247

  Fly   300 SGVMN-SADIM-SLNTWHQGLVPHSS-----------------LSHLAVSNSTPPPATSPVS--I 343
            ||:.: |:||: .|.|   |.:|.:|                 |..||..|....||...||  :
plant   248 SGLFSKSSDILQKLET---GSIPGTSADPNQQFSNLSFLNDQKLKQLAEWNLLGSPADYYVSQIL 309

  Fly   344 KVKAEPQSPPRDLSAS 359
            :...:||...::..||
plant   310 EASYKPQIGGKNNGAS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 28/80 (35%)
HJURP_C 95..155 CDD:289143 8/59 (14%)
AGL94NP_001322116.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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