DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AT1G33070

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_174583.1 Gene:AT1G33070 / 840203 AraportID:AT1G33070 Length:165 Species:Arabidopsis thaliana


Alignment Length:211 Identity:48/211 - (22%)
Similarity:73/211 - (34%) Gaps:77/211 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RKFGVMKKAYELSVLCDCEIALIIFSSSNKL--YQYASTDMDRVLLKYTEY----NEPHESLTNK 82
            ||.|:.||.|||:.|||      |.:.:.|:  :||.:.|:..:......|    |...:.||| 
plant     4 RKEGITKKLYELATLCD------IKACAGKISEHQYGARDLQDLSFHIDHYINQLNSRVKILTN- 61

  Fly    83 NIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGGAGAPRQLPNSSY 147
                    ||         |:..::.|....                  ::.|||| ..||.:..
plant    62 --------NG---------ESSSSVPPLLHT------------------SVAGAGA-APLPVAGA 90

  Fly   148 TLPVS----------VPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVYPSGSMLEMSNGYPH 202
            .||:.          :|:..||       ..|..|          |....:....:|.|:..|.:
plant    91 DLPMDQNQYEPIQLYIPIGLSY-------HIQYQH----------EIYDNFKHAHILFMNGNYYN 138

  Fly   203 SH-SPLVGSPSPGPSP 217
            .| :|.||..:.|..|
plant   139 YHQTPTVGLTTTGHMP 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 42/194 (22%)
MADS_MEF2_like 2..78 CDD:238165 18/59 (31%)
AT1G33070NP_174583.1 MADS <3..>25 CDD:469617 12/26 (46%)

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