DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mef2 and AGL81

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_198791.1 Gene:AGL81 / 833971 AraportID:AT5G39750 Length:355 Species:Arabidopsis thaliana


Alignment Length:373 Identity:74/373 - (19%)
Similarity:128/373 - (34%) Gaps:107/373 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VMKKAYELSVLCDCEIALIIFSSSNKLYQY--ASTDMDRVLLKYTEYNEP---HESLTNKNIIEK 87
            :.|||.||..|||.|..:|.:....:|..:  ....::.:.|:|::.||.   .:|:|..:.:.|
plant    35 IFKKASELCTLCDIEACVIYYGPDGELKTWPPEREKVEDIALRYSQLNEALRRKKSVTLYDFLNK 99

  Fly    88 ENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGGAGAPRQLPNSSYTLPVS 152
            :.       |....|....:|...:.|          ...:|...:       :.|.:.:..|..
plant   100 KK-------DKTNLEKKAKITDNDDLK----------TCLKNVNIL-------KYPLADHYSPDQ 140

  Fly   153 VPVPGSYGDNLLQA-SPQMS--------------------HTNISPRPSSSETDSVYPSGSMLEM 196
            |       ..|:|: .|.:|                    |.:::....:.:|.|:.||...|.|
plant   141 V-------SQLIQSLEPHVSKVRERIRFVESQKHKETKPDHQSLASSSLNHQTQSLNPSQFSLFM 198

  Fly   197 SNGYPHSHSPLVGSPSPGPSPGIAHHLSIKQQSPGSQNGRASNLRVVIPPTIAPIPPNMSAPDDV 261
               |.|..:.|...|....:....:..::.:||                    .:...:...|..
plant   199 ---YNHGDNTLSQIPVSASNFNQDYFSALLEQS--------------------ELKSQIMKQDLC 240

  Fly   262 GYADQRQSQTSLNTPVVTL-QTPIPALTSYSFGAQDFSS-----SGVMNSADIMSLNTWHQGL-V 319
            ||   .|:....|....|| |.|:.|    |...||||:     ||:|.    ..|..:.|.: :
plant   241 GY---EQNMCMSNHGDATLSQIPLSA----SNLNQDFSALLQDESGLMQ----QELCGYDQNMFM 294

  Fly   320 PHSSLSHLAVSNS---TPPPATSPVSIKVKAEPQSPPRDLSASGHQQN 364
            .:::..|..|||:   :.|.....|:......|..|      .|:.||
plant   295 NNNNFQHSFVSNTQDHSAPVVQESVNNNYGLMPHVP------CGYDQN 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 38/200 (19%)
MADS_MEF2_like 2..78 CDD:238165 15/54 (28%)
AGL81NP_198791.1 MADS_SRF_like <31..91 CDD:238166 15/55 (27%)

Return to query results.
Submit another query.