DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AT5G35120

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_198362.1 Gene:AT5G35120 / 833465 AraportID:AT5G35120 Length:107 Species:Arabidopsis thaliana


Alignment Length:124 Identity:27/124 - (21%)
Similarity:48/124 - (38%) Gaps:40/124 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKKI-----QISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDM 62
            |:||     |:.::.|| ||.:...|..:|.::....:..|.:.::                .|:
plant     8 REKIEKAQAQLQKLRDE-NRVMKARKIMWGCIEGNINVCQLGEKDL----------------KDL 55

  Fly    63 DRVLLKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEE 121
            ..|:..|.      .||  |:.:|...|||         |:..:|.||. ..|..::|:
plant    56 SSVIDDYL------NSL--KSRVEYLKKNG---------ESSSSLPPRV-VPYLNVEED 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 27/124 (22%)
MADS_MEF2_like 2..78 CDD:238165 14/79 (18%)
AT5G35120NP_198362.1 None

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