DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL53

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_198059.1 Gene:AGL53 / 832765 AraportID:AT5G27070 Length:287 Species:Arabidopsis thaliana


Alignment Length:281 Identity:64/281 - (22%)
Similarity:107/281 - (38%) Gaps:50/281 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLK 68
            ||..:|. :....:....:.|:..:.|||.|||.||:.::.:|.:....||.:....|..:|...
plant    22 KKSSLSS-SSTAKKTTNLSMREQTMFKKALELSTLCNIDVCVIYYGRDGKLIKTWPEDQSKVRDM 85

  Fly    69 YTEYNEPHE-----SLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMM-Q 127
            ...::..||     ..||.::..::.    :..|:..:|....:....|:....:.::...:. :
plant    86 AERFSRLHERERCKKRTNLSLFLRKK----ILDDTKLSEKVLEMEDSLESGLRVLQDKLLLLQPE 146

  Fly   128 RNQMAIGGAGAPRQLPNSSYTLPVSVPVPGSYGDNLLQ--ASPQMSHTNISPRPSSSETDSVYPS 190
            :||...|...|.     ||.|.|:| |.|....|:..|  ..|.||  .:|.......|.|:..:
plant   147 KNQTEFGQTRAV-----SSTTNPLS-PPPSLIEDHRHQQWTEPLMS--GVSNTEQDLSTSSLSQN 203

  Fly   191 GSMLEMSNGYPHSHSPLVGSPSPGPSPGIAHHLSIKQQSP--GSQ-NGRASNLRVVIPPTIAPIP 252
            .|.:.:.. |.|.:......|.         .:|...||.  |.| :|..||..  :||.:  .|
plant   204 QSRISVFL-YNHDNRSFYQVPD---------SVSSFDQSALLGEQGSGLGSNFD--LPPMV--FP 254

  Fly   253 PNMSAPDDVGYADQRQSQTSL 273
            |.|            |:||.|
plant   255 PQM------------QTQTPL 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 19/78 (24%)
HJURP_C 95..155 CDD:289143 12/60 (20%)
AGL53NP_198059.1 MADS_SRF_like 35..103 CDD:238166 16/67 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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