DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL99

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_196084.1 Gene:AGL99 / 830341 AraportID:AT5G04640 Length:322 Species:Arabidopsis thaliana


Alignment Length:175 Identity:41/175 - (23%)
Similarity:63/175 - (36%) Gaps:62/175 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG--RKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALI---IFSSSN-KLYQYAS 59
            ||  ::||.|..|..:.:|.|.|:||..|:..||.:|.:|.|.:||:|   :.|.|| ..|.:..
plant     1 MGGVKRKISIELIEKKDSRAVAFSKRSRGLYSKASDLCLLSDAQIAIIATPVSSKSNVSFYTFGH 65

  Fly    60 TDMDRVLLKYTEYNEPHESL--------------------------------------TNKNIIE 86
            :.:|.|:..:.....|.|.|                                      ..::..|
plant    66 SSVDNVVAAFLTNQRPREGLGLDYWWEDERLSKSEDLEELRDAMDSMSKMLKDLKDLQNQRDCEE 130

  Fly    87 KENKNGVM---------SPDSPEAETDYTLTPRTEAKYNKIDEEF 122
            ...|.||:         :|:|.....|         .:||..|||
plant   131 DVKKKGVLHGTHQKQTFNPESCSVNFD---------GFNKNTEEF 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 26/81 (32%)
HJURP_C 95..155 CDD:289143 8/28 (29%)
AGL99NP_196084.1 ARG80 5..>162 CDD:227400 35/165 (21%)
MADS_SRF_like 5..81 CDD:238166 24/75 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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