DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL79

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_189645.2 Gene:AGL79 / 822726 AraportID:AT3G30260 Length:249 Species:Arabidopsis thaliana


Alignment Length:257 Identity:70/257 - (27%)
Similarity:113/257 - (43%) Gaps:57/257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDR 64
            |||.::|:.||.::..|||||:||:.|::|||.|:|||||.|:|||:||...||::| |.:.|:|
plant     1 MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSMER 65

  Fly    65 VLLKYTEYNEPHESLTNKNI--------------------------IEKENKNGVMSPD--SPEA 101
            :|.:|.......:.:...|:                          :..|..:|:...|  ..|.
plant    66 ILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSIRDLQGVEM 130

  Fly   102 ETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAI----------GGAGAPRQLPNSSYTLPVSVPVP 156
            :.| |...:|.::.|::..|....:|:.:..:          .|.....|..|.|:.| .|:..|
plant   131 QLD-TALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDFQTQNLSHDL-ASLATP 193

  Fly   157 GSYGDNLLQASPQMSHTNISPRP------SSSETDSV--YPSGSMLEMSNG-YPHSHSPLVG 209
            ..       .||......|||.|      .:|:.|.|  ..:|:::..:|. .||....|.|
plant   194 PF-------ESPHELRRTISPPPPPLSSGDTSQRDGVGEVAAGTLIRRTNATLPHWMPQLTG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 67/249 (27%)
MADS_MEF2_like 2..78 CDD:238165 36/76 (47%)
AGL79NP_189645.2 MADS_MEF2_like 2..79 CDD:238165 36/76 (47%)
K-box 86..>151 CDD:460228 9/65 (14%)

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