DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL103

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_188495.1 Gene:AGL103 / 821396 AraportID:AT3G18650 Length:386 Species:Arabidopsis thaliana


Alignment Length:414 Identity:91/414 - (21%)
Similarity:146/414 - (35%) Gaps:101/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLT 80
            :|..:..||:..|.|||.|||:|||.::.:|.:.|:.:|..:.. :.::|......|.|..|:..
plant    31 SRATSLIKRQQTVFKKAKELSILCDIDVCVICYGSNGELKTWPE-EREKVKAIARRYGELSETKR 94

  Fly    81 NKNIIEKENKNGVMSPDSPEAETDYTLTPR--TEAKYNKIDEEFQNMMQRNQMAIGGAGAPRQLP 143
            .|..::.......|:.|.||.|....:..|  .:.||...|..|.|......|.: .....|.|.
plant    95 RKGSVDLHEFLEKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNYSVEQLMGL-VQSLERNLT 158

  Fly   144 NSSYTLPVSVPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVYPSGSMLEMSNG---YPHSHS 205
            ...:.....|..         |...::.:||:    ::.|.........:.:.||.   |..:|.
plant   159 RIQHRTCAVVEA---------QGQRRVQYTNM----ANQELMMANTMNQLQQHSNQVSMYLWNHG 210

  Fly   206 PLVGSPSPGPSPGIAHHLSIKQQSPGSQNGRASNLRVVIPPTIAPIPPN-MSAPD-DVG-YADQR 267
            .  |:.|..|...:|   |.:.||                  :|||||. |..|: |.| |    
plant   211 N--GAFSQIPVSALA---SNQTQS------------------LAPIPPELMIYPNSDAGNY---- 248

  Fly   268 QSQTSLNTPVVTLQTPIPALTSYSFGAQDFSSSGVMNSADIMSLNTWHQGLVPHSSLSHLAVSNS 332
                                 |.|.|.|....:|:.|    |::.|:: .:...:..|.....||
plant   249 ---------------------SGSLGVQGTGINGLQN----MNMLTYN-NINSVNDFSKQFDQNS 287

  Fly   333 TPPPATSPVSIKVKAEPQSPPRDLSASGHQQNSNGSTGSGGSSSSTSSNASGGAG-------GGG 390
                         :||..|     |..|..::.|....:...||..:.|....||       |..
plant   288 -------------RAESYS-----SLLGVHEDGNNEFENPNMSSRNNFNVQDCAGLLGMQGAGTN 334

  Fly   391 AVSAANVITHLNNVSVLAGGPSGQ 414
            .:.:.|:..:.||.|:.:.|.|.|
plant   335 GLQSMNMHDYSNNNSINSNGLSHQ 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 43/191 (23%)
MADS_MEF2_like 2..78 CDD:238165 19/61 (31%)
AGL103NP_188495.1 MADS_SRF_like 18..100 CDD:238166 21/69 (30%)
DUF4252 245..>304 CDD:433684 18/106 (17%)

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