Protein Alignment Mef2 and AT3G05860

DIOPT Version :9

• Sequence 1: NP_001260842.1
• Gene: Mef2 / 36032
• FlyBaseID: FBgn0011656
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_187237.2
• Gene: AT3G05860 / 819755
• AraportID: AT3G05860
• Length: 260
• Species: Arabidopsis thaliana
• Alignment Length: 254
• Identity: 64/254 - (25%)
• Similarity: 108/254 - (42%)
• Gaps: 62/254 - (24%)

  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFS--SSNKLYQYASTDMD 63
            |.|||:.:|.||:|..|:.||||||.|::||.:||||||..|...:|:|  :||.....:::::.
plant     1 MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPSNSEVK 65

  Fly    64 RVL--------LKYTEYNEPHESLTNKNI---IEKENKNGVMSPDSPEAETDYTLTPRTEAKYNK 117
            .|:        |:..:....||....:||   :|..||..:.:.:....|..:.|......|.|.
plant    66 NVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQLLSGKGEKLNL 130

  Fly   118 IDEEFQNMMQRNQMAIGGAGAPRQLPNSSYTLPVSVPVPGSYGDNLLQ-----ASPQMSHTNISP 177
            .|...:::.:                               |.|..|:     .:..::.::|.|
plant   131 TDRNREDLCK-------------------------------YIDQYLKELYHHKNKTINQSHIEP 164

  Fly   178 RPSSSETDSVYPSGSMLEMSNGYPHSHSPLVGS-PSPGPSPGIAHHLSIKQQSPGSQNG 235
            ..||..|:::.|: |::|          |::.| ..|..:|.. :|||..|.....|.|
plant   165 GESSGATNAMTPT-SVVE----------PIISSIQRPNQNPNF-NHLSHNQYQYQQQFG 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mef2	NP_001260842.1	MADS_MEF2_like	2..78	CDD:238165	31/85 (36%)
		HJURP_C	95..155	CDD:289143	5/59 (8%)
AT3G05860	NP_187237.2	MADS_SRF_like	2..85	CDD:238166	30/82 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5068
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810