DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL57

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_187060.1 Gene:AGL57 / 819565 AraportID:AT3G04100 Length:207 Species:Arabidopsis thaliana


Alignment Length:149 Identity:45/149 - (30%)
Similarity:70/149 - (46%) Gaps:20/149 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVL 66
            |::||::.::.:..:|.:||:|||.|:.||..||..:||.|:|.:|||...|.|.:|...|.:|.
plant    14 GKQKIEMKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTFAHPSMKKVA 78

  Fly    67 --LKYTEYNEPHESLTNKNIIEKENKNG----VMSPDSPEAETDYTL-------TPRTEAKYNKI 118
              ||.....||.|....:.::|...|..    |...::.|.|....|       ..|.|.|.:|:
plant    79 DRLKNPSRQEPLERDDTRPLVEAYKKRRLHDLVKKMEALEEELAMDLEKLKLLKESRNEKKLDKM 143

  Fly   119 DEEF-------QNMMQRNQ 130
            ...|       :.:.||.|
plant   144 WWNFPSEGLSAKELQQRYQ 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 30/77 (39%)
HJURP_C 95..155 CDD:289143 11/50 (22%)
AGL57NP_187060.1 MADS 14..85 CDD:294078 28/70 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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