DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL6

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_182089.1 Gene:AGL6 / 819173 AraportID:AT2G45650 Length:252 Species:Arabidopsis thaliana


Alignment Length:371 Identity:77/371 - (20%)
Similarity:124/371 - (33%) Gaps:143/371 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WFNIGSFFETMKP-----NIRVLKLFGLFPYTISQAKGRSFPSNSHHSNNRCNHSKTLKSEVKFI 67
            :|.|||||:..:.     |.::|.:.      |:..|.:..||                      
plant    93 YFLIGSFFKLFQDLLSFVNPQLLSIL------ITFIKNKDAPS---------------------- 129

  Fly    68 DIAIFTLWQTFFLQMLYVSWPKMFLNMPVSRIITMVTLILYLLAGFNCSV------SATLVLLFR 126
                   |..|.:.:|      |||...|.      ||||:....: |.|      ||...:::|
plant   130 -------WWGFCIAVL------MFLTSLVQ------TLILHQHFQY-CFVTGMRLRSAITGIIYR 174

  Fly   127 KKFL------------HMVQL--VEEADFLFSKYFYEIQHSKHHLVCVAL----------LLGSF 167
            |..:            .:|.|  |:...|.....|..:..|....:|:||          :|...
plant   175 KSLVITNSAKRSSTVGEVVNLMSVDAQRFQDLTTFLNMLWSAPLQICLALYFLWQALGPSVLAGV 239

  Fly   168 ACQGLLI-LNDYTAGKMLVNTTLSLQSMPMQAITSYYYIIRSIHISCVVAFISG-----LYSFRD 226
            |...||| :|.:.|.|     |.:.|...||...|...::..|        ::|     ||::..
plant   240 AVMVLLIPINAFIAMK-----TRAFQVEQMQYKDSRIKLMNEI--------LNGIKVLKLYAWEP 291

  Fly   227 RFF-----AFNKQLRICFVEKHSGEQAASYRVLMNHIQGFT-------------AIY-----SNL 268
            .|.     ..||:|.|.        :.|:|   :|.:..|.             |:|     .|:
plant   292 SFAQKVLEIRNKELNIL--------KKAAY---LNALSTFAWTSAPFLVALTTFAVYVTVDEKNI 345

  Fly   269 CDAIGIFCTIFAWQPMMFCASLIVTVV-------FSILTIGHMLTN 307
            .||...|.::..:..:.|..:::..|:       .||..|.:.|.|
plant   346 LDAEKAFVSLSLFNILRFPLNMLPQVISNLAQASVSIKRIQNFLAN 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 51/230 (22%)
MADS_MEF2_like 2..78 CDD:238165 13/74 (18%)
AGL6NP_182089.1 MADS_MEF2_like 2..72 CDD:238165
K-box 87..171 CDD:460228 27/125 (22%)
Blue background indicates that the domain is not in the aligned region.

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