DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL48

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_181550.1 Gene:AGL48 / 818613 AraportID:AT2G40210 Length:371 Species:Arabidopsis thaliana


Alignment Length:408 Identity:82/408 - (20%)
Similarity:138/408 - (33%) Gaps:144/408 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSS-------------- 51
            |.|||:::..|.::::|..:..|.:.|::||..||::||.....:||||..              
plant     1 MTRKKVKLVWIENDKSRATSLQKMRVGLLKKVKELTILCAVRAIVIIFSPDKVGPLVWPSPQATH 65

  Fly    52 ----------NKLYQYASTDMDRVLLKYT-EYNEPHESLTNKN---IIEK---ENKNGVMSPDSP 99
                      ..:.:...::::..|.:.| ::.|..:....||   :|::   :.::|....|..
plant    66 GLLDEFFALPKSVQKKKESNVESYLKEKTHKFQEQLKKSKKKNKEHVIDELMMQLQSGREIADLN 130

  Fly   100 EAE--------TDYTLTPRTEAKYNKID--------------EEFQNMMQRNQMAIGG------A 136
            ::|        .|..|..|.:..:.:..              |||:.  ..|...:||      |
plant   131 QSEMYALLSFSRDTILLCRKKLAFMQFPPLRDPPVFPFEIQVEEFKT--TTNDGFVGGGQDNKRA 193

  Fly   137 G----APRQLPNSSYTLPVSV---------PVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVY 188
            |    |.|.:....:....|.         |.|..|     :...||.:.|  |.|.|..   :|
plant   194 GRTDEATRFINTDIFKQSKSYYFFDEWVFPPSPPKY-----EIPQQMENGN--PNPKSYR---LY 248

  Fly   189 PSGSMLEMSNGYPH-----------SHSPLVGSPSPGPSPGIAHHLSIKQQSPGSQNGRASNLRV 242
            ...|    |||.||           :...|.||.|   .| :.||..|..               
plant   249 QGSS----SNGNPHLEMDPFRLQMMTSQGLAGSVS---QP-LQHHSMINN--------------- 290

  Fly   243 VIPPTIAPIPPNMSAPD----DVGYADQ---RQSQTSLNTPVVTL-----QTPIPALTSYSFGAQ 295
               ||:|...|:....|    ::|..:.   ..||..::...:|.     |.|.|.:|:..    
plant   291 ---PTMAMNQPSQDPFDYMRSELGINEGININNSQFYMSNNTITANDGVRQEPYPNVTTAG---- 348

  Fly   296 DFSSSGVMNSADIMSLNT 313
                   .|:.|..:.||
plant   349 -------ENNGDATTSNT 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 57/284 (20%)
MADS_MEF2_like 2..78 CDD:238165 20/100 (20%)
AGL48NP_181550.1 MADS_SRF_like 2..85 CDD:238166 17/82 (21%)

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