DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL41

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_180256.2 Gene:AGL41 / 817229 AraportID:AT2G26880 Length:184 Species:Arabidopsis thaliana


Alignment Length:119 Identity:22/119 - (18%)
Similarity:40/119 - (33%) Gaps:51/119 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 GSNGNVEQATNLSVLSHAQQHHLGMPNSRPSSTGHIT----PTPGAPSSDQDVRLAAVAVQQQQQ 482
            |.:.:||:|.|.:..:..    :.:.:.|.:.:.::.    |||..|                  
plant   102 GGDLDVERARNTNEATRI----INIDSLRENKSYYLIDQWFPTPEPP------------------ 144

  Fly   483 QPHQQQQLGDYDAPNHKRPRISGGWGTXPARAAGSSHYKPHHNNNTGCSSINGS 536
            :|...||:| |:..|.:                   .|.|:..     ||.||:
plant   145 KPVTYQQIG-YETSNRR-------------------GYNPYQG-----SSSNGN 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400
MADS_MEF2_like 2..78 CDD:238165
AGL41NP_180256.2 None
Blue background indicates that the domain is not in the aligned region.

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