DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL33

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_180200.1 Gene:AGL33 / 817172 AraportID:AT2G26320 Length:109 Species:Arabidopsis thaliana


Alignment Length:71 Identity:27/71 - (38%)
Similarity:44/71 - (61%) Gaps:2/71 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNK--LYQYASTDMD 63
            |||||:::.||...:.|...|:|||.|:.|||.|:::|||.:|.||:.|.:.|  ::...|....
plant    17 MGRKKLKLKRIESLKERSSKFSKRKKGLFKKAEEVALLCDSDIMLIVVSPTEKPTVFNTRSRSFH 81

  Fly    64 RVLLKY 69
            .:|.::
plant    82 TILERF 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 26/70 (37%)
HJURP_C 95..155 CDD:289143
AGL33NP_180200.1 MADS_SRF_like 18..100 CDD:238166 26/70 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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