DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mef2 and AGL95

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_179168.2 Gene:AGL95 / 816059 AraportID:AT2G15660 Length:250 Species:Arabidopsis thaliana


Alignment Length:149 Identity:28/149 - (18%)
Similarity:51/149 - (34%) Gaps:65/149 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGR------KKIQISR-ITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYA 58
            |||      |||:.:: :.:|:.|:..:              .:||..:..:|:||         
plant     1 MGREQQVKSKKIEENKGMVNEKGRRTNY--------------IILCAVKACIIMFS--------- 42

  Fly    59 STDMDRVLLKYTEYNEPHESLTNKNIIE----------KENKNGVMS-PDSPEAETDYTLTPRTE 112
                            |||       :|          ::..:|..: ||..:.:...:|....:
plant    43 ----------------PHE-------VEPMVWPSFEKARDLLDGFFALPDIKKKKKQMSLEMYLK 84

  Fly   113 AKYNKIDEEFQNMMQRNQM 131
            .|..|:.|:|.. .||..|
plant    85 EKTKKVHEQFMK-TQRKHM 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 28/149 (19%)
MADS_MEF2_like 2..78 CDD:238165 14/82 (17%)
AGL95NP_179168.2 MADS 7..78 CDD:469617 17/116 (15%)

Return to query results.
Submit another query.