DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AGL30

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001318187.1 Gene:AGL30 / 814835 AraportID:AT2G03060 Length:386 Species:Arabidopsis thaliana


Alignment Length:439 Identity:99/439 - (22%)
Similarity:163/439 - (37%) Gaps:128/439 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYAST--DMD 63
            |||.|::|.::.:...||.||.|||.|::|||.|||:|||.:|.|::||.:.|......|  .|:
plant     1 MGRVKLKIKKLENTNGRQSTFAKRKNGILKKANELSILCDIDIVLLMFSPTGKAAICCGTRSSME 65

  Fly    64 RVLLKYTEY------NEPHESLTN-KNIIEK-----------ENKNGVMSPDSPEA--------E 102
            .|:.|:::.      ....|||.| |...:|           .:.|..:...|.:|        |
plant    66 EVIAKFSQVTPQERTKRKFESLENLKKTFQKLDHDVNIREFIASSNSTVEDLSTQARILQARISE 130

  Fly   103 TDYTLTPRTEA-KYNKIDEEFQ---------NMMQRNQMAIGGAGAPRQLPNSSY-------TLP 150
            ....|:..||. |.|.::...|         :.::.::...|......|:.|:::       ::.
plant   131 IHGRLSYWTEPDKINNVEHLGQLEISIRQSLDQLRAHKEHFGQQQQAMQIENANFVKDWSTCSMQ 195

  Fly   151 VSVPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVYPSGSMLEMSNGYPHSHSPLVGSPSPGP 215
            ..:.:|      |.|....||..      .:|.|.::     :.|..|..|........|.|.|.
plant   196 DGIQIP------LEQQLQSMSWI------LNSNTTNI-----VTEEHNSIPQREVECSASSSFGS 243

  Fly   216 SPGIAHHLSIKQQSPGSQNGRASNLRVVIPPTIAPIPPNMSAP-DDVGYADQRQSQTSLNTPVVT 279
            .||.            ...|::               |.|:.| .:..:.|:      |||..:.
plant   244 YPGY------------FGTGKS---------------PEMTIPGQETSFLDE------LNTGQLK 275

  Fly   280 LQTPIPALTSYSFGAQDFSSSGVMNSADIMSLNTWHQGLVPHSSLSHLAVSNSTPPPATSP---V 341
            ..|.         ..|.|:::.        ::..::..|  |:.::|.......|.|.|.|   |
plant   276 QDTS---------SQQQFTNNN--------NITAYNPNL--HNDMNHHQTLPPPPLPLTLPHAQV 321

  Fly   342 SIKVKAEP-------QSPPRDLSASGHQQNSNGSTGSGGSSSSTSSNAS 383
            .|.:....       ::||.|.||  :..|:| .|..|.||||...:.|
plant   322 YIPMNQREYHMNGFFEAPPPDSSA--YNDNTN-QTRFGSSSSSLPCSIS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 30/83 (36%)
HJURP_C 95..155 CDD:289143 12/84 (14%)
AGL30NP_001318187.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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