DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mef2 and AGL64

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001077625.1 Gene:AGL64 / 5007741 AraportID:AT1G29962 Length:185 Species:Arabidopsis thaliana


Alignment Length:166 Identity:39/166 - (23%)
Similarity:67/166 - (40%) Gaps:49/166 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVL 66
            |:::|.|.:|..:.:|.||.:||:.|:..|..|||:||..|:|.:.:|.|.|.|.:.|.....|.
plant     8 GKQRINIKKIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPYTFGSPSFQAVA 72

  Fly    67 LKYTE------------------------------YNEPHESLTNKNIIEKENKNGVMSPDSPEA 101
            .::..                              ||...|.:|.:.:  |..|...::      
plant    73 ERFLNGEASSSSSSSLQRSVMNAHQQAKIQELCKVYNRLVEEITVEEV--KLKKTAALA------ 129

  Fly   102 ETDYTLTPRTEAKYNKID-------EEFQNMMQRNQ 130
                .:.|..|..:.|:|       ||.:.||:::|
plant   130 ----EMMPMNEDAWWKVDPNDVKDREEVKKMMEKHQ 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 26/105 (25%)
HJURP_C 95..155 CDD:289143 9/43 (21%)
AGL64NP_001077625.1 MADS_MEF2_like 8..80 CDD:238165 24/71 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.