DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and MEF2D

DIOPT Version :9

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_005911.1 Gene:MEF2D / 4209 HGNCID:6997 Length:521 Species:Homo sapiens


Alignment Length:525 Identity:170/525 - (32%)
Similarity:226/525 - (43%) Gaps:180/525 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRV 65
            ||||||||.||||||||||||.|||||:||||||||||||||||||||:.||||:||||||||:|
Human     1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKV 65

  Fly    66 LLKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTL--TPRTEAKYNKIDEEFQNMMQR 128
            |||||||||||||.||.:|||...|.|....||||.:.:.:|  :|..|.||.:..||...:.:|
Human    66 LLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRR 130

  Fly   129 NQMAIGGAGAPRQLPNSSYTLPVSVPVPGSYGDNLLQASPQMSHTN------------------I 175
            ....:         |..::.:||:|||..       |:|.|.|:.:                  :
Human   131 YGSTV---------PAPNFAMPVTVPVSN-------QSSLQFSNPSGSLVTPSLVTSSLTDPRLL 179

  Fly   176 SPRPSSSETDSVYP--------SGSM----LEMSNGYPHSHSPLVGSPSPGPSPGIAHHLSIKQQ 228
            ||:..:.:.:||.|        :|:|    |..:||         ..|||     :.:.....:.
Human   180 SPQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANG---------ACPSP-----VGNGYVSARA 230

  Fly   229 SPG---SQNGRASNLRVVIPPTIAPIPPNMSA--------PD---------------------DV 261
            |||   ..||.:.| :|:  |..:|.||..|.        ||                     |:
Human   231 SPGLLPVANGNSLN-KVI--PAKSPPPPTHSTQLGAPSRKPDLRVITSQAGKGLMHHLTEDHLDL 292

  Fly   262 GYADQ---RQSQTSLNTPVVTLQTP-----------IPAL--TSYSFGAQDFSSSGVMNSADIMS 310
            ..|.:   .||..||.||||::.||           :|..  |.|...:.:.||....:|...:|
Human   293 NNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTSAELSSLPAFSSPGGLS 357

  Fly   311 L---NTWHQ-----------------------------------------------GLVPHSSLS 325
            |   ..|.|                                               .|:|.|.|.
Human   358 LGNVTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVSLSNLIPGSPLP 422

  Fly   326 HL--AVSNSTPPPATSPVSIKVKAEPQSPPRDLS---------ASGHQQNSNGSTGSGGSSSSTS 379
            |:  |::.:|.|      .|.:|:||.||.|:.|         .:...:..:|.:...|.|..|.
Human   423 HVGAALTVTTHP------HISIKSEPVSPSRERSPAPPPPAVFPAARPEPGDGLSSPAGGSYETG 481

  Fly   380 SNASG 384
            ....|
Human   482 DRDDG 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 MADS_MEF2_like 2..78 CDD:238165 68/75 (91%)
HJURP_C 95..155 CDD:289143 16/61 (26%)
MEF2DNP_005911.1 MADS_MEF2_like 2..78 CDD:238165 68/75 (91%)
HJURP_C 97..152 CDD:315100 18/70 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..207 7/32 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..266 7/24 (29%)
Beta domain 286..292 0/5 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 357..407 4/49 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..521 12/50 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7673
eggNOG 1 0.900 - - E1_COG5068
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 261 1.000 Inparanoid score I3106
Isobase 1 0.950 - 0 Normalized mean entropy S2674
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D320201at33208
OrthoFinder 1 1.000 - - FOG0000108
OrthoInspector 1 1.000 - - otm40628
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X116
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.880

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