DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and MEF2A

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001386957.1 Gene:MEF2A / 4205 HGNCID:6993 Length:543 Species:Homo sapiens


Alignment Length:207 Identity:41/207 - (19%)
Similarity:65/207 - (31%) Gaps:79/207 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STRLKYWFNIGSFFETMKPNIRVLKLFGLFPYTISQAKGRSFPSNSHH--SNNRCNHSKTLKSEV 64
            ||.|.:....||.:..|.|.:.:                       ||  :::..:::.|..:  
Human   286 STGLTFMDRAGSLYWPMSPFLSL-----------------------HHPRASSTLSYNGTTSA-- 325

  Fly    65 KFIDIAIFTLWQTFFLQMLYVSWPKMFLNMPVSRIITMVTLILYLLAGFNCSVSATLVLLFRKKF 129
                               |.|.|     ||.|.::|..:|      |.|.|.|..       ..
Human   326 -------------------YPSHP-----MPYSSVLTQNSL------GNNHSFSTA-------NG 353

  Fly   130 LHMVQLVEEADFLFSKYFYEIQHSKHHLVCVALLLG-----SFACQGLLILNDYTAGKMLVNTTL 189
            |.:.:||..          ||.::.|||...||...     |..|.|...||..:...:...|:.
Human   354 LSVDRLVNG----------EIPYATHHLTAAALAASVPCGLSVPCSGTYSLNPCSVNLLAGQTSY 408

  Fly   190 SLQSMPMQAITS 201
            ....:|..::||
Human   409 FFPHVPHPSMTS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 41/207 (20%)
MADS_MEF2_like 2..78 CDD:238165 10/77 (13%)
MEF2ANP_001386957.1 ARG80 1..280 CDD:227400
MADS_MEF2_like 2..78 CDD:238165
HJURP_C 141..198 CDD:463543
Blue background indicates that the domain is not in the aligned region.

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