Protein Alignment Mef2 and srfb

DIOPT Version :9

• Sequence 1: NP_001260842.1
• Gene: Mef2 / 36032
• FlyBaseID: FBgn0011656
• Length: 606
• Species: Drosophila melanogaster
• Sequence 2: NP_956925.1
• Gene: srfb / 393604
• ZFINID: ZDB-GENE-040426-1294
• Length: 314
• Species: Danio rerio
• Alignment Length: 206
• Identity: 52/206 - (25%)
• Similarity: 85/206 - (41%)
• Gaps: 53/206 - (25%)

  Fly     2 GRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVL 66
            ||.||::..|.::..|..||:|||.|:||||||||.|...::.|::.|.:..:|.:|:..:..::
Zfish   157 GRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMI 221

  Fly    67 LKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQM 131
                      .|.|.|.:|:    ..:.|||||         ||::.
Zfish   222 ----------TSETGKALIQ----TCLNSPDSP---------PRSDC------------------ 245

  Fly   132 AIGGAGAPRQLPNSSY---TLPVSVPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVYPSGSM 193
                  :.:::..|.|   .|...|....|.|:......|..:   :|..|.|:....|.|:.|:
Zfish   246 ------SDQRMSASGYEETELTYQVSESESLGEGKDSLKPVFT---VSSLPGSTSATPVTPTSSV 301

  Fly   194 LEMSNGYPHSH 204
            |..:.....||
Zfish   302 LHTALTCSVSH 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Mef2	NP_001260842.1	MADS_MEF2_like	2..78	CDD:238165	25/75 (33%)
		HJURP_C	95..155	CDD:289143	11/62 (18%)
srfb	NP_956925.1	MADS_SRF_like	157..238	CDD:238166	30/94 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910