DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and AT5G26865

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001332282.1 Gene:AT5G26865 / 28721199 AraportID:AT5G26865 Length:126 Species:Arabidopsis thaliana


Alignment Length:180 Identity:38/180 - (21%)
Similarity:64/180 - (35%) Gaps:57/180 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTNKNIIEKE 88
            |:..:.|||.|||.|||.|:.:|::|...:|.:....|..:|......:::.||.       |:.
plant     2 REDTMFKKALELSTLCDIEVCVILYSRDGELIKTWPEDQSKVRDMAERFSKLHER-------ERR 59

  Fly    89 NKNGVMSPDSPEAETDYTLTPRTEAKYN-KIDEEFQNMMQRNQMAIGGAGAPRQLPNSSYTLPVS 152
            .|           .|:.:|..|.:...| |:.|:...|....:..:      |.|.         
plant    60 KK-----------RTNLSLFLRKKILDNSKLSEKVLEMKDSLESGL------RVLQ--------- 98

  Fly   153 VPVPGSYGDNLLQASPQMSHTNISPRPSSSETDSVYPSGSMLEMSNGYPH 202
                    |.||...|:.:.|.:               |.:..::||..|
plant    99 --------DKLLLLQPEKNQTEL---------------GQIPVINNGQNH 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 38/180 (21%)
MADS_MEF2_like 2..78 CDD:238165 17/53 (32%)
AT5G26865NP_001332282.1 MADS_SRF_like <1..64 CDD:238166 20/79 (25%)

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