DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and mbx1

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001342711.1 Gene:mbx1 / 2540643 PomBaseID:SPBC19G7.06 Length:457 Species:Schizosaccharomyces pombe


Alignment Length:447 Identity:108/447 - (24%)
Similarity:170/447 - (38%) Gaps:147/447 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTD----MD 63
            |:.||  ||:|.:|:.:|||:|:.|::|||:|||||||.::.::||.|.|..:.|:|.:    .|
pombe    15 RRSIQ--RISDAKNKALTFNRRRLGLIKKAHELSVLCDAKVVVMIFDSKNACHVYSSEEPEEQRD 77

  Fly    64 RVLLKYTEYN----EPHESLTNKNIIEKE----------------------NKNGVMSPDSP--- 99
            .:|.|:...:    :|..:: |.||...|                      :.|...:.||.   
pombe    78 ALLQKFLNKDFVTVDPLRNI-NPNIPSDESLHNWRPKDKRIASVTTYSAQPSNNCSSATDSENDF 141

  Fly   100 -----EAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIGGAGAPRQLPNSSYTLPVSVPVPGSY 159
                 ::.|.|..||.|.::..||:                          |.|:|....|   |
pombe   142 QSFTIKSSTTYHTTPTTASENKKIE--------------------------SITIPDHASV---Y 177

  Fly   160 GDNLLQASPQMSHTNISP----------RPSSSETDSVYPSGSMLEMSNGYPHSHSPLVGSPSP- 213
            .|  |..||.:.|:.:||          .||||.:.||.|..  |..:..:.|:..|...:..| 
pombe   178 ND--LPLSPTVKHSFVSPVSGDYSDSPLEPSSSSSFSVPPES--LNPTLSFQHNDVPQTDNFIPF 238

  Fly   214 --------GPSPGIAHHLSIK--QQSPGSQNG--RASNLRV------------------VIPPTI 248
                    |.|...|...|::  |.....:||  |.|.|..                  .:.|:.
pombe   239 LTPKRQAYGQSSSRADRSSVRRSQSFKNRRNGKPRISRLHTSHASIDGLTDFIQSPSSGYLDPSS 303

  Fly   249 APIPPNMSA---------PDDVGYADQRQSQTSLNTPVVTLQTP----IP---------ALTSYS 291
            .||.|..||         ||::|..::.:..:..|...:..:.|    :|         .:.|.|
pombe   304 TPITPLDSAINQITPPFLPDNLGQENRGELYSHDNPTSMVYEHPKFDELPNGFIDTHELNILSRS 368

  Fly   292 FGA---QDFSSSGVMNSADIMSLN----TWHQGLVPHSSLS-HLAVSNSTPPPATSP 340
            |.|   |....|.::|. |..:.|    || ..|:..:.:. .|....|:.|.:|.|
pombe   369 FTASPNQILRESNMVNQ-DSFTDNPVDATW-DALIGTTQIDLDLDYERSSIPSSTIP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 66/247 (27%)
MADS_MEF2_like 2..78 CDD:238165 32/82 (39%)
mbx1NP_001342711.1 ARG80 1..452 CDD:227400 108/447 (24%)

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