DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mef2 and mbx2

DIOPT Version :10

Sequence 1:NP_001260842.1 Gene:Mef2 / 36032 FlyBaseID:FBgn0011656 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_596507.1 Gene:mbx2 / 2540350 PomBaseID:SPBC317.01 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:408 Identity:107/408 - (26%)
Similarity:155/408 - (37%) Gaps:104/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRV 65
            ||||||.|:.|||:|:|.|||.|||.|:.||||||:||.|||:|:.:.....:|:.:.|:|..|.
pombe     1 MGRKKISIAPITDDRSRSVTFVKRKQGLYKKAYELAVLADCEVAVTVIDRKGRLHVFCSSDYQRT 65

  Fly    66 LLKYTEYNEPHESLTNKNIIEKENKNGVMSPDSPEAETDYTLTPRTEA--------KYNKIDEEF 122
            |          :.|...:|.|.:|::...|  ||..|:. |::|.|..        |:.|..:: 
pombe    66 L----------QQLNTLSIYELKNRSHFSS--SPVEESS-TVSPETTTGSFTPLNNKHLKSQDQ- 116

  Fly   123 QNMMQRNQMAIGGAGAPRQLPNSSYTLPV-SVPVPGSYGDNLLQASPQM---SHTNISPRPSSSE 183
              .:..:|:..|.:.|..:.....|...| |...|.....|.:::.|..   .|.:...||..  
pombe   117 --PLSDSQLDTGDSPATSETTVQDYNPQVQSYCRPEPLSSNHVRSCPPFPPTQHHHPHTRPPH-- 177

  Fly   184 TDSVYPSGSMLEMSNGYPHSHSPLVGSP-------SPGPSPGIAHHLSIKQQSP-GSQNG----- 235
                :|.         :||.|:.....|       |||.:..:.||      || .|.||     
pombe   178 ----HPP---------HPHFHNNNYPPPYCFQSPVSPGATVPLQHH------SPYPSDNGFPGHR 223

  Fly   236 RASNLRVVIPPTIAPIPPNMSAPDDVGYADQRQSQTSLNTPVVTLQTPIPALTSYSFGAQDFSSS 300
            |.::......|..|..|.....|..:|....:|.|::.:..|  |..|    .||......::..
pombe   224 RQTHFAPYYYPQRATSPSLKQVPTYLGTHVLQQDQSTYDQKV--LMPP----ASYLSSPNQYTLK 282

  Fly   301 GVM--NSADIMSLNTWHQGLVPHSSLSHLAVSNSTPPPATSPVSIKVKAEPQSPPRDLSASGHQQ 363
            .|.  |.|            .|.....|       |.|..:|....||.....||          
pombe   283 NVSPGNPA------------CPPFLYEH-------PNPQLTPEMFDVKQGSPIPP---------- 318

  Fly   364 NSNGSTGSGGSSSSTSSN 381
                 |...|||..||.:
pombe   319 -----TAYSGSSCETSQH 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mef2NP_001260842.1 ARG80 1..>203 CDD:227400 63/213 (30%)
MADS_MEF2_like 2..78 CDD:238165 35/75 (47%)
mbx2NP_596507.1 ARG80 1..372 CDD:227400 107/408 (26%)

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