DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFa and flp-1

DIOPT Version :10

Sequence 1:NP_523669.2 Gene:FMRFa / 36030 FlyBaseID:FBgn0000715 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_501592.1 Gene:flp-1 / 177737 WormBaseID:WBGene00001444 Length:175 Species:Caenorhabditis elegans


Alignment Length:148 Identity:57/148 - (38%)
Similarity:80/148 - (54%) Gaps:55/148 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LEGMAKRAAMDRYGRDPKQDFMRFGR-------------DPKQDFMRFGRDPKQDFMRFGR---D 182
            |:.|.||          |.:|||:||             ||  :|:||||. :.:|:|||:   |
 Worm    63 LQKMEKR----------KPNFMRYGRSAAVKSLGKKAGSDP--NFLRFGRS-QPNFLRFGKASGD 114

  Fly   183 PKQDFMRFGR-DPKQDFMRFGRTPAE-DFMRFGRTPAE-DFMRFGRS-DNFMRFGRSPHEELRSP 243
            |  :|:|||| ||  :|:|||:..|: :|:|||:..|: :|:||||| |||.|..|.|       
 Worm   115 P--NFLRFGRSDP--NFLRFGKAAADPNFLRFGKRSADPNFLRFGRSFDNFDRESRKP------- 168

  Fly   244 KQDFMRFGRPDNFMRFGR 261
                       ||:|||:
 Worm   169 -----------NFLRFGK 175

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