DRSC/TRiP Functional Genomics Resources

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Protein Alignment FMRFa and flp-13

DIOPT Version :9

Sequence 1:NP_523669.2 Gene:FMRFa / 36030 FlyBaseID:FBgn0000715 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_501255.1 Gene:flp-13 / 177547 WormBaseID:WBGene00001456 Length:160 Species:Caenorhabditis elegans


Alignment Length:157 Identity:49/157 - (31%)
Similarity:73/157 - (46%) Gaps:35/157 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VLHFQKHGRKPRYKYDPELEAKRRS------VQDNFMHFGKRQAEQLPPEGSYAESDELEGMAKR 140
            :|..|...:.|.:::   ||..:||      :....:.||||.|:..|                 
 Worm    25 MLDEQYDTKNPFFQF---LENSKRSDRPTRAMDSPLIRFGKRAADGAP----------------- 69

  Fly   141 AAMDRYGRDPK-QDFMRFGRDPKQ--DFMRFGRDPK-QDFMRFGR--DPKQDFMRFGRDPKQ-DF 198
              :.|:||.|: ..|:|||:....  ..:||||.|: ..|:|||:  .|....:||||.|.. ..
 Worm    70 --LIRFGRAPEASPFIRFGKRAADGAPLIRFGRAPEASPFIRFGKRASPSAPLIRFGRSPSAVPL 132

  Fly   199 MRFGRTPAEDFMRFGRTPAEDFMRFGR 225
            :||||:.|...:||||..:...:||||
 Worm   133 IRFGRSAAAPLIRFGRASSAPLIRFGR 159



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2E6Q5
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto20016
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR20986
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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