DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IL16 and Patj

DIOPT Version :9

Sequence 1:NP_001339615.1 Gene:IL16 / 3603 HGNCID:5980 Length:1382 Species:Homo sapiens
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:1141 Identity:215/1141 - (18%)
Similarity:359/1141 - (31%) Gaps:450/1141 - (39%)


- Green bases have known domain annotations that are detailed below.


Human   224 RKSLSQQLDCPAG--KAAGTSRPTRSLSTAQLVQPSGG-----LQASVISNI--VLMKGQAKGLG 279
            ::|.|.....|..  |:.|.....|..|     |.|.|     |.|:..:.|  :.:.....|||
  Fly   101 QRSSSHSHSAPGSPDKSGGVGEEPRPQS-----QNSKGAGVADLYATDYAQIQAIELVNDGTGLG 160

Human   280 FSIVGGKDSIYGPIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQA--- 341
            |.|:|.::|     |:.||||..||.|..||||:.||.||::...::..:..:......:|:   
  Fly   161 FGIIGARNS-----GVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTH 220

Human   342 --------------------KKGLLTLTVRTRLTAPPS-----LCSHLSPPLC--RSLSSSTCIT 379
                                :.|  |..|.||:...|:     |.|...|.:.  .|.:|:...|
  Fly   221 VRLVVARPVEQSVPTPQYALEPG--TAVVPTRVLVDPAELERYLISTGYPEIFGESSTASTPQTT 283

Human   380 KDSSSFALESPSAPISTAKPNYRI----------MVEVSLQKEAGVGLGIGLCSVPYFQC----I 430
            .:...|.....::.:  ..||..:          .::|.|:|:|. ||||   ::..:.|    :
  Fly   284 TEDDRFVYRGETSML--IDPNIDLEELLALPETEKLQVELKKDAN-GLGI---TIAGYVCEKEEL 342

Human   431 SGIFVHTLSPGSVAHLDGRLRCGDEIVEISDSPVHCLTLNEVYTILSHCDPGPVPIIVSRHPDPQ 495
            |||||.::||||.|.|.||:|..|.|:|:....:      :.|               |.|    
  Fly   343 SGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSL------QGY---------------SNH---- 382

Human   496 VSEQQLKEAVAQAVENTKFGKERHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPHRRAQKVMIR 560
                       ||||..|  |.....:|    |||....|             |...:.|:.:  
  Fly   383 -----------QAVELLK--KSGQVVNL----RLERYLRG-------------PKFEQLQQAI-- 415

Human   561 SSSDSSYMSGSPGGSPGSGSAEKPSSDVDISTHSPSLPLAREPVVLSIASSRLPQESPPLPESRD 625
             :::....|.:| |:|.......|.:....:|.:||..:.||          |.:|:.|.||:..
  Fly   416 -AANDKLPSSAP-GTPSRAPMPTPVATTSSATTTPSRSITRE----------LEEEALPAPEAFM 468

Human   626 SHPPLRLKKSFEILVRKPMSSKPKPPPRKYFKSDSDPQKSLEERENSSCSSGHTPPTCGQEAREL 690
            :.||     |...:....:||         |.:.    |.|....:|...|....||      |:
  Fly   469 TTPP-----SVTTMTTTTLSS---------FGAG----KQLVAVRDSLDGSTKIIPT------EV 509

Human   691 LPLLLPQEDTAGRSPSASAGCPGPGIGPQTKSSTEGEPGWRRASPVTQTSPIKHPLLKRQARMDY 755
            :||       |.::.:.::|.                        :|              |..|
  Fly   510 VPL-------ADKTEAKNSGV------------------------IT--------------RHKY 529

Human   756 SFDTTAEDPWVRISDCIKNLFSPIMSENHGHMPLQPNASLNEEEGTQGHPDGTPPKLDTANGTPK 820
            ..|                                                            |:
  Fly   530 YTD------------------------------------------------------------PE 534

Human   821 VYKSADSSTVKKGPPVAPKPAWFRQSLKGLRNRASDPRGLPDPALSTQPAPASREHLGSHIRASS 885
            :...|::..::|         |                               ::.:||.:..  
  Fly   535 LSDDAETEIIRK---------W-------------------------------QKIVGSDVEV-- 557

Human   886 SSSSIRQRISSFETFGSSQLPDKGAQRLSLQPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQ 950
                |..:|..|...|                        ||...||......||..       :
  Fly   558 ----IVAQIKKFAVGG------------------------LGISLEGTVDVEGGREV-------R 587

Human   951 PEQVLSSGSPAASEARDPGVSESPPPGRQPNQKTLPPGPDPLLRLLSTQAEESQGPVLKMPSQRA 1015
            |...:.|                          .||.||..:..:|.:..|              
  Fly   588 PHHYIRS--------------------------ILPDGPVGVNGVLRSGDE-------------- 612

Human  1016 RSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEGAS--PTSS 1078
                          ||:....:|..::.....|::|.   ||..:   :..|.....:|  |.|.
  Fly   613 --------------LLEVNGERLLGMNHLEVVAILKE---LPLDV---RMVCGRNRNSSLLPFSD 657

Human  1079 SNEDSAANGSAETSALDTGFSLNLSELREYTEGLTEAKEDDD-GDHSSLQSGQSVISLLSSEELK 1142
            ......:|              |...|...|:.|.:||.|.. ....|:..|.||.:..:|    
  Fly   658 DTLKKLSN--------------NFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAAS---- 704

Human  1143 KLIEEVKVLDEATLKQLDGIHV-----TILHKEEG-AGLGFSL---AGGADLENKVITVHRVFPN 1198
                 ...|...:|:.|.|:.:     .|:...:| .|||||:   ....|..:.:|.:..:.|.
  Fly   705 -----FSKLKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPG 764

Human  1199 GLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAMPDLNSSTDS 1263
            |:|..:|.:..|:.:|.:|..:|:..:...|:..|:.|.:.     |.|....:.:|..::|..:
  Fly   765 GVAQLDGRLIPGDRLLFVNSINLENASLDQAVQALKGASKG-----VVRIGVAKPLPMTDNSLKA 824

Human  1264 AASASAASDVSVES--TEATVCTVTLEKM--SAGLG 1295
            .::||..|:.::::  :...:.||....|  ||.:|
  Fly   825 CSNASTTSEETLDAQPSPPALPTVAPPAMPPSASMG 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IL16NP_001339615.1 PDZ_signaling 268..351 CDD:238492 27/107 (25%)
PDZ_signaling 406..488 CDD:238492 27/85 (32%)
COG1615 <911..1006 CDD:332639 14/94 (15%)
PDZ_signaling 1162..1239 CDD:238492 20/85 (24%)
PDZ 1284..1370 CDD:214570 6/14 (43%)
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492 24/76 (32%)
PDZ_signaling 318..400 CDD:238492 37/127 (29%)
PDZ_signaling 557..643 CDD:238492 25/182 (14%)
PDZ_signaling 726..807 CDD:238492 20/85 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4782
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

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