DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1441 and FAR1

DIOPT Version :9

Sequence 1:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_197642.1 Gene:FAR1 / 832311 AraportID:AT5G22500 Length:491 Species:Arabidopsis thaliana


Alignment Length:495 Identity:129/495 - (26%)
Similarity:225/495 - (45%) Gaps:93/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIK-DIFQNVLFDQVKQMRGE 98
            :::.|||..|||.||||||:||....:|:||||:|....|...:|:: ::.:..||..::...||
plant    12 KTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEIDLFKVLRNNLGE 76

  Fly    99 EHI----LQQVVAIAGDVLSPGLGISEKDL-ETLRQEVSIVYHCAATVRFDEPLRNAVFMNTRGT 158
            :::    .:::|.:.||:....||:.:.|| :.:..|:.|:.:.|||..|||.....:.:||.| 
plant    77 DNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFDERYDIGLGINTFG- 140

  Fly   159 KYMLELALTLKHLDFFAYCSTAYCHLHVKTLY----------EKPY--------DPPADPH---- 201
                    .|..|:|...|......|||.|.|          |||:        |...|.:    
plant   141 --------ALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETLSGDRELDINIEHD 197

  Fly   202 ------KVMQACEWLTDDEVAT------IERKVLGAIPNTYAYTKSLAEALVVEKFEELPAVILR 254
                  |.:|.|   :|:|::.      :.|..|...||||.:||::.|.|:.:..|.||.||:|
plant   198 LMKQKLKELQDC---SDEEISQTMKDFGMARAKLHGWPNTYVFTKAMGEMLMGKYRENLPLVIIR 259

  Fly   255 PSIVIPIWKEPIPGWTDNINGPTGLLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWRNI 319
            |:::.....||.|||.:.:.....:::..|||.::....:|:...|.:|.|:.||.::.|:..: 
plant   260 PTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAH- 323

  Fly   320 TAGTDKTNRVAHMTSSNDIKVSWAEIIEL-GRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVL 383
             :|......:.|:.||....|::.::.:. .|:..  |.||.|....|            |.:|.
plant   324 -SGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFA--KRPLIGRNGSP------------IIVVK 373

  Fly   384 FQWMPALFVDALLWILRY--PPVLCRVQNRIY-------------------KGFEVFEYYANNVW 427
            ...:..:...:|...|||  |..:.|:.|.:|                   :..|:::.|.....
plant   374 GTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIKLAMRLVELYQPYLLFKG 438

  Fly   428 NFD--NSEAVKLRKLMNNKE-RRTYVIEKIELDLIDYFTN 464
            .||  |:|.:::::..|.|| ..::..:...:|..:|.||
plant   439 IFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 127/493 (26%)
FAR-N_SDR_e 35..348 CDD:187547 100/352 (28%)
Sterile 385..475 CDD:281068 21/104 (20%)
FAR1NP_197642.1 PLN02996 1..490 CDD:215538 129/495 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1111.030

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