DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1441 and FAR8

DIOPT Version :9

Sequence 1:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_190042.2 Gene:FAR8 / 823581 AraportID:AT3G44560 Length:496 Species:Arabidopsis thaliana


Alignment Length:501 Identity:136/501 - (27%)
Similarity:219/501 - (43%) Gaps:106/501 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIK-DIFQNVLFDQVKQMR 96
            :.:::.:||.||||.||.|||:||....:.::||::|....:...:|:: :.|:..||..::...
plant    10 QNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFEKDLFKVLRDNL 74

  Fly    97 GEEH----ILQQVVAIAGDVLSPGLGISEKDL-ETLRQEVSIVYHCAATVRFDEPLRNAVFMNTR 156
            |:|.    :.::||.:|||:....||:.:.:| |.:::|:.||.:.|||..|||.....:.:||.
plant    75 GDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGINTF 139

  Fly   157 GTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLY---EKPYDPPADPHKVMQAC----------- 207
            |         .|..|:|...|..|...|||.|.|   |||...|..|..:.:.|           
plant   140 G---------ALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEICNENGLQLDINL 195

  Fly   208 -------------EWLTDDEVAT-------IERKVLGAIPNTYAYTKSLAEALVVEKFEELPAVI 252
                         |....:|..|       :||..|...||||.:|||:.|.|:....|.||.||
plant   196 ERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKSMGEMLLGNHKENLPLVI 260

  Fly   253 LRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWR 317
            :||:::.....||.|||.:.:.....::|..||||::....:.:...|.:|.|:..|.::.|:..
plant   261 IRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAAT 325

  Fly   318 NITAGTDKTNRVAHMTSSNDIKVSWAEIIE-LGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICM 381
            :  ||..|.:.|..:.||:...:.:.||.| |..:..:|.:...      .|||        |.:
plant   326 H--AGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRSR------NGSM--------ITV 374

  Fly   382 VLFQWMPALFVDALLWILRY--PPVLCRVQNRIYKGFEVFEYYANNVWNFDNSEAVKLRKLMNNK 444
            ...:.:|.|.:.:|...:||  |..|.::.:.||...|..||                    .||
plant   375 SKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEY--------------------KNK 419

  Fly   445 ERR------------TYVIEKIELDLIDYFTNCVLCARRLILKESD 478
            .|:            .||:.|   .:.|......|||::   ||.|
plant   420 NRKIDMVMRLVKLYEPYVLFK---GIFDDRNTKNLCAKQ---KEED 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 130/485 (27%)
FAR-N_SDR_e 35..348 CDD:187547 105/353 (30%)
Sterile 385..475 CDD:281068 22/103 (21%)
FAR8NP_190042.2 PLN02996 1..495 CDD:215538 136/501 (27%)
FAR-N_SDR_e 12..362 CDD:187547 106/360 (29%)
Sterile 394..495 CDD:281068 21/92 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.940

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